RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 JPT2Q9H910 190 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 IL1RAPQ9NPH3 570 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 COMMD8Q9NX08 183 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 IL37Q9NZH6 218 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 UXTQ9UBK9 157 aaPredicted RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 CYTH4Q9UIA0 394 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 PSORS1C1Q9UIG5 152 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 KIAA1257Q9ULG3 409 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 CCL26Q9Y258 94 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 OR1A2Q9Y585 309 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 SNX5Q9Y5X3 404 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 MYO9BQ13459 2157 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 TICRRQ7Z2Z1 1910 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ZNF638Q14966 1978 aaKnown RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 SPTBN5Q9NRC6 3674 aaKnown RBP3.15□□□□□ -1.9
CD44-219ENST00000525685 EYSQ5T1H1 3165 aa3.15□□□□□ -1.9
CD44-219ENST00000525685 KIAA1549LQ6ZVL6 1849 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 IGHV3-38A0A0C4DH36 116 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 TMEM129A0AVI4 362 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 SHISA7A6NL88 538 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 YJEFN3A6XGL0 299 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 E7ENQ6 273 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 H0YIG0 161 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 CCSO14618 274 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 P2RX6O15547 441 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 PSMD3O43242 534 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 COCHO43405 550 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 MED7O43513 233 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 KIAA0513O60268 411 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 SNAP91O60641 907 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 OR6A2O95222 327 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 PDGFBP01127 241 aaPredicted RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 IGHV3-13P01766 116 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 CHRNGP07510 517 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 MBL2P11226 248 aaPredicted RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 PSMC3P17980 439 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 PAX7P23759 505 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 GDI1P31150 447 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 CDH5P33151 784 aaPredicted RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 RPL34P49207 117 aaKnown RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 DAOAP59103 153 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 KRTAP10-3P60369 221 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 GALK2Q01415 458 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 SIGLEC14Q08ET2 396 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 PTPN20Q4JDL3 420 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 FILIP1LQ4L180 1135 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 MUC21Q5SSG8 566 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 ZNF343Q6P1L6 599 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 NHLRC1Q6VVB1 395 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 ZNF841Q6ZN19 808 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 FAM183BPQ6ZVS7 135 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 MTERF4Q7Z6M4 381 aaKnown RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 SCD5Q86SK9 330 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 SLC25A42Q86VD7 318 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 CACUL1Q86Y37 369 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 UBALD2Q8IYN6 164 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 ABHD12Q8N2K0 398 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 SPC24Q8NBT2 197 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 PRSS33Q8NF86 280 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 OR6F1Q8NGZ6 308 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 FAM222BQ8WU58 562 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 NDRG1Q92597 394 aaKnown RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 HAS2Q92819 552 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 PIWIL1Q96J94 861 aaKnown RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 HSFY1Q96LI6 401 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 CXorf58Q96LI9 332 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 CYP2S1Q96SQ9 504 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 DDX50Q9BQ39 737 aaKnown RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 ACPTQ9BZG2 426 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 XPO4Q9C0E2 1151 aaKnown RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 ZFP14Q9HCL3 533 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 HPS4Q9NQG7 708 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 ZCCHC3Q9NUD5 404 aaKnown RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 UTP6Q9NYH9 597 aaKnown RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 IFNKQ9P0W0 207 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 THAP10Q9P2Z0 257 aaPredicted RBP3.15□□□□□ -1.91
CD44-219ENST00000525685 SCML2Q9UQR0 700 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 CPQQ9Y646 472 aa3.15□□□□□ -1.91
CD44-219ENST00000525685 MYH10P35580 1976 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 IGHV3-20A0A0C4DH32 117 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 LOC390937A0A1W2PQ73 354 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 OR5H15A6NDH6 313 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 IGLON5A6NGN9 336 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 ARHGEF33A8MVX0 844 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 FBP2O00757 339 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 CHADO15335 359 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 HSF2BPO75031 334 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 CSO75390 466 aaKnown RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 EPOP01588 193 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 GYPCP04921 128 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 RALAP11233 206 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 EDNRAP25101 427 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 SHC1P29353 583 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 ACADSBP45954 432 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 IFNAR2P48551 515 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 SLC1A6P48664 564 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 FHITP49789 147 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 KHKP50053 298 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 ATP4BP51164 291 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms