RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 ACKR4Q9NPB9 350 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 TAS2R1Q9NYW7 299 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 A0A087WZY1 265 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 CENPVL1A0A0U1RR11 272 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 FAM166BA8MTA8 275 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 FAM47E-STBD1D6RA91 191 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 GSTA4O15217 222 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 GMNNO75496 209 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 HPNP05981 417 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 UQCRBP14927 111 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 PGM1P36871 562 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 RFC3P40938 356 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 SLC6A8P48029 635 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF117Q03924 483 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 SKP2Q13309 424 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 ELOAQ14241 798 aaKnown RBP17.04■□□□□ 0.32
PTPRK-218ENST00000525459 MRPL2Q5T653 305 aaKnown RBP17.04■□□□□ 0.32
PTPRK-218ENST00000525459 DHRS4L2Q6PKH6 230 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 RINLQ6ZS11 566 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 SLC26A7Q8TE54 656 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 ZG16BQ96DA0 208 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 GNRHR2Q96P88 292 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 CDRT15Q96T59 188 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 DKKL1Q9UK85 242 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 SHANK1Q9Y566 2161 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 CDHR4A6H8M9 788 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 C2orf72A6NCS6 295 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 ANKUB1A6NFN9 424 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 GYG2O15488 501 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 AQP1P29972 269 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 GCKP35557 465 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 MAGEA5P43359 124 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF41P51814 821 aaPredicted RBP17.03■□□□□ 0.32
PTPRK-218ENST00000525459 EEF1A1P68104 462 aaKnown RBP17.03■□□□□ 0.32
PTPRK-218ENST00000525459 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
PTPRK-218ENST00000525459 CBFBQ13951 182 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF836Q6ZNA1 936 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 SIAH3Q8IW03 269 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF843Q8N446 348 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 TMCO5AQ8N6Q1 288 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 ARSGQ96EG1 525 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 RNF145Q96MT1 663 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 PINK1Q9BXM7 581 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 OR2B2Q9GZK3 357 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 DSN1Q9H410 356 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 KLHL28Q9NXS3 571 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 ICAM5Q9UMF0 924 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 NTNG1Q9Y2I2 539 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 CHD6Q8TD26 2715 aa17.03■□□□□ 0.32
PTPRK-218ENST00000525459 MFN2O95140 757 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 C8BP07358 591 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 UBTFL6P0CB48 400 aaPredicted RBP17.02■□□□□ 0.32
PTPRK-218ENST00000525459 BNIP2Q12982 314 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 SLC10A1Q14973 349 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 FXNQ16595 210 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 GLYR1Q49A26 553 aaPredicted RBP17.02■□□□□ 0.32
PTPRK-218ENST00000525459 OR5M10Q6IEU7 315 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 VRK2Q86Y07 508 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 C1GALT1C1Q96EU7 318 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 GPR137Q96N19 417 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 BTBD10Q9BSF8 475 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 MUC13Q9H3R2 512 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 ASF1BQ9NVP2 202 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 MED11Q9P086 117 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.02■□□□□ 0.32
PTPRK-218ENST00000525459 MAGEL2Q9UJ55 1249 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 SLC13A4Q9UKG4 626 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 CARD8Q9Y2G2 431 aa17.02■□□□□ 0.32
PTPRK-218ENST00000525459 DNAJC13O75165 2243 aa17.02■□□□□ 0.31
PTPRK-218ENST00000525459 M0QX08 132 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 SYT5O00445 386 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 SUSD5O60279 629 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 HCN1O60741 890 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 IGHG3P01860 377 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 RFPL3SP0C7P2 107 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 EDN3P14138 238 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 PGCP20142 388 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 DPP4P27487 766 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 TOMM20Q15388 145 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 RNFT1Q5M7Z0 435 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 CCDC121Q6ZUS5 278 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 ZNF550Q7Z398 422 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 GHDCQ8N2G8 530 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 OR5W2Q8NH69 310 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 ZBTB8AQ96BR9 441 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 SH3YL1Q96HL8 342 aaPredicted RBP17.01■□□□□ 0.31
PTPRK-218ENST00000525459 PLSCR2Q9NRY7 297 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 DNAJB12Q9NXW2 375 aaKnown RBP17.01■□□□□ 0.31
PTPRK-218ENST00000525459 CD300AQ9UGN4 299 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 FBXL2Q9UKC9 423 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 SVILO95425 2214 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 ZNF407Q9C0G0 2248 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 LINC01387J3KSC0 135 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 FAAHO00519 579 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 CXCR6O00574 342 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 NUDT14O95848 222 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 GGT1P19440 569 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 KDELR2P33947 212 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 CCR4P51679 360 aa17.01■□□□□ 0.31
PTPRK-218ENST00000525459 TDGF1P3P51864 188 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms