RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 A0A0D9SG52 128 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 GAPDHSO14556 408 aaPredicted RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 VEGFDO43915 354 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 SFTPDP35247 375 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 PBX1P40424 430 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 XCR1P46094 333 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 PPP2CAP67775 309 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 SOHLH1Q5JUK2 328 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 AADACL3Q5VUY0 350 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 FBXL22Q6P050 247 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 OR9A2Q8NGT5 310 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 GIMAP1Q8WWP7 306 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 GPR20Q99678 358 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 TMEM181Q9P2C4 612 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 KCNK5O95279 499 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 HOXA11P31270 313 aaPredicted RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 NUDT1P36639 197 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 GABRA4P48169 554 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 CARD18P57730 90 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 CILP2Q8IUL8 1156 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 ST8SIA2Q92186 375 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 NSUN5Q96P11 429 aaKnown RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 IL26Q9NPH9 171 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 GSK3AP49840 483 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 SLC45A3Q96JT2 553 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 SORCS2Q96PQ0 1159 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 CCNL2Q96S94 520 aaPredicted RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 DPH1Q9BZG8 443 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 RANGRFQ9HD47 186 aaPredicted RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 SLC22A23A1A5C7 686 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TMEM235A6NFC5 223 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TUSC2O75896 110 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 PPP3CBP16298 524 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 IL2RGP31785 369 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 SNCAP37840 140 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 VIPR2P41587 438 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 DLX5P56178 289 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF776Q68DI1 518 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TMEM200AQ86VY9 491 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF454Q8N9F8 522 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TMEM104Q8NE00 496 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 GPR148Q8TDV2 347 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 NIPSNAP3BQ9BS92 247 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 HLA-HP01893 362 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 SHMT2P34897 504 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TRIM23P36406 574 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 GK3PQ14409 553 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 IL20RBQ6UXL0 311 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 APOOLQ6UXV4 268 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 OR4C5Q8NGB2 326 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TVP23CQ96ET8 276 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ARHGAP39Q9C0H5 1083 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 METTL17Q9H7H0 456 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZDHHC18Q9NUE0 388 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ATRNL1Q5VV63 1379 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 OR6C76A6NM76 312 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 IRAK2O43187 625 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 KCNK2O95069 426 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 PABPC4LP0CB38 370 aaKnown RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 OR13C7P0DN81 318 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF30P17039 623 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 LAP3P28838 519 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ETV1P50549 477 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 WNT4P56705 351 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 KCNC3Q14003 757 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 RNLSQ5VYX0 342 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF551Q7Z340 670 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 KIAA0907Q7Z7F0 614 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 OR8J2Q8NGG1 315 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF587Q96SQ5 575 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TMPRSS5Q9H3S3 457 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 GNB4Q9HAV0 340 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 RAB27BO00194 218 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 AQP7O14520 342 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 KLF11O14901 512 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TMEM115Q12893 351 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 PIN1Q13526 163 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 SOWAHAQ2M3V2 549 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 CATSPEREQ5SY80 951 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ABHD15Q6UXT9 468 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF704Q6ZNC4 412 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 KCTD13Q8WZ19 329 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ARPC5LQ9BPX5 153 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ANKUB1A6NFN9 424 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ADAM12O43184 909 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TGOLN2O43493 480 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TNFSF4P23510 183 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TIA1P31483 386 aaKnown RBP eCLIP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TPRG1Q6ZUI0 275 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 LSMEM2Q8N112 164 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TMEM217Q8N7C4 229 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 FRMD1Q8N878 549 aa12.92□□□□□ -0.34
LRRK1-202ENST00000525284 TXNDC5Q8NBS9 432 aaKnown RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 APOBEC3GQ9HC16 384 aaKnown RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF331Q9NQX6 463 aaPredicted RBP12.92□□□□□ -0.34
LRRK1-202ENST00000525284 H3BML4 177 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms