RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 SFRP5Q5T4F7 317 aa21.31■■□□□ 1
USP47-205ENST00000525257 MISPQ8IVT2 679 aa21.31■■□□□ 1
USP47-205ENST00000525257 TUSC5Q8IXB3 177 aa21.31■■□□□ 1
USP47-205ENST00000525257 COX18Q8N8Q8 333 aa21.31■■□□□ 1
USP47-205ENST00000525257 SMAP2Q8WU79 429 aaPredicted RBP21.31■■□□□ 1
USP47-205ENST00000525257 JADE3Q92613 823 aa21.31■■□□□ 1
USP47-205ENST00000525257 PPCDCQ96CD2 204 aa21.31■■□□□ 1
USP47-205ENST00000525257 ZBED6CLQ96FA7 236 aaPredicted RBP21.31■■□□□ 1
USP47-205ENST00000525257 IQCGQ9H095 443 aaKnown RBP21.31■■□□□ 1
USP47-205ENST00000525257 NGBQ9NPG2 151 aa21.31■■□□□ 1
USP47-205ENST00000525257 SH3BP4Q9P0V3 963 aa21.31■■□□□ 1
USP47-205ENST00000525257 NTMQ9P121 344 aa21.31■■□□□ 1
USP47-205ENST00000525257 KLHL13Q9P2N7 655 aa21.31■■□□□ 1
USP47-205ENST00000525257 TBK1Q9UHD2 729 aa21.31■■□□□ 1
USP47-205ENST00000525257 DCDC2Q9UHG0 476 aa21.31■■□□□ 1
USP47-205ENST00000525257 LIPT1Q9Y234 373 aa21.31■■□□□ 1
USP47-205ENST00000525257 RIPK2O43353 540 aa21.3■■□□□ 1
USP47-205ENST00000525257 ALOX5P09917 674 aa21.3■■□□□ 1
USP47-205ENST00000525257 RNF144AP50876 292 aaPredicted RBP21.3■■□□□ 1
USP47-205ENST00000525257 FAPQ12884 760 aa21.3■■□□□ 1
USP47-205ENST00000525257 RNPS1Q15287 305 aaKnown RBP21.3■■□□□ 1
USP47-205ENST00000525257 CFAP157Q5JU67 520 aa21.3■■□□□ 1
USP47-205ENST00000525257 CLEC6AQ6EIG7 209 aa21.3■■□□□ 1
USP47-205ENST00000525257 HMBOX1Q6NT76 420 aa21.3■■□□□ 1
USP47-205ENST00000525257 BANPQ8N9N5 519 aa21.3■■□□□ 1
USP47-205ENST00000525257 KBTBD8Q8NFY9 601 aa21.3■■□□□ 1
USP47-205ENST00000525257 CLHC1Q8NHS4 586 aa21.3■■□□□ 1
USP47-205ENST00000525257 CPNE4Q96A23 557 aaPredicted RBP21.3■■□□□ 1
USP47-205ENST00000525257 ZNF764Q96H86 408 aaPredicted RBP21.3■■□□□ 1
USP47-205ENST00000525257 TSSK3Q96PN8 268 aa21.3■■□□□ 1
USP47-205ENST00000525257 SLCO5A1Q9H2Y9 848 aa21.3■■□□□ 1
USP47-205ENST00000525257 REEP4Q9H6H4 257 aa21.3■■□□□ 1
USP47-205ENST00000525257 LRTM1Q9HBL6 345 aa21.3■■□□□ 1
USP47-205ENST00000525257 TIGARQ9NQ88 270 aa21.3■■□□□ 1
USP47-205ENST00000525257 C1orf109Q9NX04 203 aa21.3■■□□□ 1
USP47-205ENST00000525257 PSMC3IPQ9P2W1 217 aaPredicted RBP21.3■■□□□ 1
USP47-205ENST00000525257 SNX8Q9Y5X2 465 aa21.3■■□□□ 1
USP47-205ENST00000525257 A0A1W2PP18 115 aa21.29■■□□□ 1
USP47-205ENST00000525257 A0A1W2PQD3 144 aa21.29■■□□□ 1
USP47-205ENST00000525257 H3BQF6 201 aa21.29■■□□□ 1
USP47-205ENST00000525257 UROSP10746 265 aa21.29■■□□□ 1
USP47-205ENST00000525257 EFNA1P20827 205 aaPredicted RBP21.29■■□□□ 1
USP47-205ENST00000525257 PRPH2P23942 346 aa21.29■■□□□ 1
USP47-205ENST00000525257 EIF1P41567 113 aaKnown RBP21.29■■□□□ 1
USP47-205ENST00000525257 SERPINB4P48594 390 aa21.29■■□□□ 1
USP47-205ENST00000525257 ZNF117Q03924 483 aa21.29■■□□□ 1
USP47-205ENST00000525257 ZNF672Q499Z4 452 aaPredicted RBP21.29■■□□□ 1
USP47-205ENST00000525257 MZB1Q8WU39 189 aa21.29■■□□□ 1
USP47-205ENST00000525257 HSD17B8Q92506 261 aa21.29■■□□□ 1
USP47-205ENST00000525257 KISS1RQ969F8 398 aaPredicted RBP21.29■■□□□ 1
USP47-205ENST00000525257 CHMP6Q96FZ7 201 aa21.29■■□□□ 1
USP47-205ENST00000525257 METTL2AQ96IZ6 378 aaKnown RBP21.29■■□□□ 1
USP47-205ENST00000525257 C16orf45Q96MC5 204 aaPredicted RBP21.29■■□□□ 1
USP47-205ENST00000525257 CCT7Q99832 543 aa21.29■■□□□ 1
USP47-205ENST00000525257 RNF212BA8MTL3 300 aa21.28■■□□□ 1
USP47-205ENST00000525257 EFNA2O43921 213 aa21.28■■□□□ 1
USP47-205ENST00000525257 NUDT14O95848 222 aa21.28■■□□□ 1
USP47-205ENST00000525257 ADAP00813 363 aa21.28■■□□□ 1
USP47-205ENST00000525257 IGHV4-39P01824 125 aa21.28■■□□□ 1
USP47-205ENST00000525257 SDC1P18827 310 aa21.28■■□□□ 1
USP47-205ENST00000525257 ELK4P28324 431 aa21.28■■□□□ 1
USP47-205ENST00000525257 ADH6P28332 368 aa21.28■■□□□ 1
USP47-205ENST00000525257 LCN1P31025 176 aa21.28■■□□□ 1
USP47-205ENST00000525257 FRKP42685 505 aaPredicted RBP21.28■■□□□ 1
USP47-205ENST00000525257 NAA20P61599 178 aa21.28■■□□□ 1
USP47-205ENST00000525257 POU6F2P78424 691 aaPredicted RBP21.28■■□□□ 1
USP47-205ENST00000525257 BSPH1Q075Z2 132 aa21.28■■□□□ 1
USP47-205ENST00000525257 TRMT10CQ7L0Y3 403 aaKnown RBP21.28■■□□□ 1
USP47-205ENST00000525257 FCRLAQ7L513 359 aa21.28■■□□□ 1
USP47-205ENST00000525257 ATP6V1C2Q8NEY4 427 aa21.28■■□□□ 1
USP47-205ENST00000525257 FBXO27Q8NI29 283 aa21.28■■□□□ 1
USP47-205ENST00000525257 PHOSPHO1Q8TCT1 267 aa21.28■■□□□ 1
USP47-205ENST00000525257 YAE1D1Q9NRH1 226 aa21.28■■□□□ 1
USP47-205ENST00000525257 GIN1Q9NXP7 522 aa21.28■■□□□ 1
USP47-205ENST00000525257 BAIAP2L1Q9UHR4 511 aa21.28■■□□□ 1
USP47-205ENST00000525257 CADP27708 2225 aa21.27■■□□□ 1
USP47-205ENST00000525257 A0A1W2PPM1 405 aa21.27■■□□□ 1
USP47-205ENST00000525257 NPIPB8E9PQR5 432 aa21.27■■□□□ 1
USP47-205ENST00000525257 SLC28A1O00337 649 aa21.27■■□□□ 1
USP47-205ENST00000525257 OIP5O43482 229 aa21.27■■□□□ 1
USP47-205ENST00000525257 RGS14O43566 566 aa21.27■■□□□ 1
USP47-205ENST00000525257 TBX19O60806 448 aa21.27■■□□□ 1
USP47-205ENST00000525257 NDUFS7O75251 213 aa21.27■■□□□ 1
USP47-205ENST00000525257 GLRA3O75311 464 aa21.27■■□□□ 1
USP47-205ENST00000525257 PROCP04070 461 aa21.27■■□□□ 1
USP47-205ENST00000525257 OR2T11Q8NH01 316 aa21.27■■□□□ 1
USP47-205ENST00000525257 FCRL1Q96LA6 429 aa21.27■■□□□ 1
USP47-205ENST00000525257 BTBD2Q9BX70 525 aa21.27■■□□□ 1
USP47-205ENST00000525257 POTEKPQ9BYX7 375 aa21.27■■□□□ 1
USP47-205ENST00000525257 ACSS1Q9NUB1 689 aaPredicted RBP21.27■■□□□ 1
USP47-205ENST00000525257 FIS1Q9Y3D6 152 aa21.27■■□□□ 1
USP47-205ENST00000525257 NPIPA5A0A0B4J1W7 369 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 NPIPA7E9PJI5 369 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 ZNF195O14628 629 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 CD5LO43866 347 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 ADAM11O75078 769 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 PRKD3O94806 890 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 YES1P07947 543 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 NPIPA8P0DM63 369 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 DNAJB13P59910 316 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms