RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 PPIBP23284 216 aaKnown RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 PGM1P36871 562 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 ZNF136P52737 540 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 MLLT10P55197 1068 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 NRG3P56975 720 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 EEFSECP57772 596 aaKnown RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 KCNJ2P63252 427 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 MXRA7P84157 204 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 ZNF117Q03924 483 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 FADDQ13158 208 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 ZNF169Q14929 603 aaPredicted RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 FXNQ16595 210 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 EIPR1Q53HC9 387 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 MRPL2Q5T653 305 aaKnown RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 IRAK1BP1Q5VVH5 260 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 SLC22A10Q63ZE4 541 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 ZNF324BQ6AW86 544 aaPredicted RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 REEP3Q6NUK4 255 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 BHLHB9Q6PI77 547 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 ENPP6Q6UWR7 440 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 ARSKQ6UWY0 536 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 PLXDC2Q6UX71 529 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 BNC2Q6ZN30 1099 aaPredicted RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 CCDC80Q76M96 950 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 VTCN1Q7Z7D3 282 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 SERPINA11Q86U17 422 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 SPPL2CQ8IUH8 684 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 SIAH3Q8IW03 269 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 TMEM251Q8N6I4 163 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 FADS6Q8N9I5 356 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 GOLM1Q8NBJ4 401 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 FAM71CQ8NEG0 241 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 OR2T12Q8NG77 320 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 OR52P1PQ8NH57 321 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 POC1BQ8TC44 478 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 FIG4Q92562 907 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 SNRNP40Q96DI7 357 aaKnown RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 REXO5Q96IC2 774 aaKnown RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 JSRP1Q96MG2 331 aaPredicted RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 SLC25A18Q9H1K4 315 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 DEFB127Q9H1M4 99 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 ADNPQ9H2P0 1102 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 DSN1Q9H410 356 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 METTL7AQ9H8H3 244 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 BCL2L10Q9HD36 194 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 UBQLN4Q9NRR5 601 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 DNAJB12Q9NXW2 375 aaKnown RBP5.9□□□□□ -1.46
CD44-214ENST00000525211 TNFRSF10DQ9UBN6 386 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 TEKT2Q9UIF3 430 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 B3GNT3Q9Y2A9 372 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 SNX13Q9Y5W8 968 aa5.9□□□□□ -1.46
CD44-214ENST00000525211 COL6A6A6NMZ7 2263 aa5.9□□□□□ -1.47
CD44-214ENST00000525211 SHANK1Q9Y566 2161 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ZNF407Q9C0G0 2248 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 TRAV17A0A0B4J275 112 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 A0A0G2JPF8 293 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 TCRBV5S2A0A599 114 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ELOVL7A1L3X0 281 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 DUXAA6NLW8 204 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 HNRNPCL2B2RXH8 293 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 HNRNPCL3B7ZW38 293 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 H0YC42 278 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 CXCR6O00574 342 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ARPC2O15144 300 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 HS6ST1O60243 411 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 HNRNPCL1O60812 293 aaKnown RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 LYPD3O95274 346 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 OPN1LWP04000 364 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 P04436 131 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 NGFRP08138 427 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 PABPC4LP0CB38 370 aaKnown RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 UBTFL6P0CB48 400 aaPredicted RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 HNRNPCL4P0DMR1 293 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 HSD17B1P14061 328 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 KLK2P20151 261 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 PTNP21246 168 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ATP6V1C1P21283 382 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 HTR2AP28223 471 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 HTR1EP28566 365 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 SHC1P29353 583 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 KDELR2P33947 212 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ACAA2P42765 397 aaKnown RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 MAGEA5P43359 124 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 KCNJ5P48544 419 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 TPD52P55327 224 aaPredicted RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 B3GALT5-AS1P59052 145 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 GABPB1Q06547 395 aaPredicted RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 C19orf57Q0VDD7 668 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 SKP2Q13309 424 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 EFR3AQ14156 821 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 FGFBP1Q14512 234 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 C3AR1Q16581 482 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ZNF630Q2M218 657 aaPredicted RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 IQCCQ4KMZ1 466 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 CMPK2Q5EBM0 449 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 DCST1Q5T197 706 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ATAD3BQ5T9A4 648 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 TIGD3Q6B0B8 471 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 GLYATQ6IB77 296 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms