RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ZNF117Q03924 483 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 KLHL26Q53HC5 615 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 MTERF4Q7Z6M4 381 aaKnown RBP16.68■□□□□ 0.26
CAPN1-203ENST00000525013 CDC20BQ86Y33 519 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 VPS37AQ8NEZ2 397 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 OR8J2Q8NGG1 315 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 SLC35G5Q96KT7 338 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 KLHDC3Q9BQ90 382 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 OPN3Q9H1Y3 402 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-203ENST00000525013 LIME1Q9H400 295 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 RNF122Q9H9V4 155 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 MEAF6Q9HAF1 191 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 CARD8Q9Y2G2 431 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 PRRC2AP48634 2157 aaKnown RBP16.68■□□□□ 0.26
CAPN1-203ENST00000525013 UQCRHLA0A096LP55 91 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 PRSS51A0A1B0GVH4 220 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 C7orf72A4D263 438 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 DUXAA6NLW8 204 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 OIP5O43482 229 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 AQP8O94778 261 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 FCGR2AP12318 317 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 ATP12AP54707 1039 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 CASP9P55211 416 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 NME5P56597 212 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 WDR4P57081 412 aaKnown RBP16.67■□□□□ 0.26
CAPN1-203ENST00000525013 RAC1P63000 192 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 OCRLQ01968 901 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 TESK1Q15569 626 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 ANXA8L1Q5VT79 327 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 OR10D3Q8NH80 312 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 SDF2Q99470 211 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 NDRG3Q9UGV2 375 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 DTNAQ9Y4J8 743 aa16.67■□□□□ 0.26
CAPN1-203ENST00000525013 SH3D21A4FU49 640 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 TNFSF11O14788 317 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 CASKO14936 926 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 SYNGR4O95473 234 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 PLGP00747 810 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-203ENST00000525013 PSMA4P25789 261 aaKnown RBP16.66■□□□□ 0.26
CAPN1-203ENST00000525013 EIF1P41567 113 aaKnown RBP16.66■□□□□ 0.26
CAPN1-203ENST00000525013 KCNJ5P48544 419 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 IST1P53990 364 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 CLNS1AP54105 237 aaKnown RBP16.66■□□□□ 0.26
CAPN1-203ENST00000525013 MAGOHP61326 146 aaKnown RBP16.66■□□□□ 0.26
CAPN1-203ENST00000525013 FAM27E3Q08E93 113 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 FGFBP1Q14512 234 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 NDUFAF6Q330K2 333 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
CAPN1-203ENST00000525013 CBLN3Q6UW01 205 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 C16orf62Q7Z3J2 963 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 TMCO5AQ8N6Q1 288 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 RFWD2Q8NHY2 731 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 POC1BQ8TC44 478 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 TESCQ96BS2 214 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 DACH2Q96NX9 599 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 SLC39A3Q9BRY0 314 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 SERHL2Q9H4I8 314 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 THAP1Q9NVV9 213 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 NKIRAS1Q9NYS0 192 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 MARCOQ9UEW3 520 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-203ENST00000525013 ST6GALNAC2Q9UJ37 374 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 MCTS1Q9ULC4 181 aaKnown RBP16.66■□□□□ 0.26
CAPN1-203ENST00000525013 EDARQ9UNE0 448 aa16.66■□□□□ 0.26
CAPN1-203ENST00000525013 SDHDO14521 159 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 ANKRD28O15084 1053 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 CXCL13O43927 109 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 STX11O75558 287 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 LINGO3P0C6S8 592 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 KITP10721 976 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 IL11P20809 199 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 UQCRC2P22695 453 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 S100A3P33764 101 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 SFTPDP35247 375 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 CD79BP40259 229 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 SLC6A8P48029 635 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 P2RX1P51575 399 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 CCR4P51679 360 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 PHC1P78364 1004 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 FOXF1Q12946 379 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 POU4F3Q15319 338 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 GPR68Q15743 365 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 FAM174BQ3ZCQ3 159 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 SPANXN4Q5MJ08 99 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 PDSS1Q5T2R2 415 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 PDZK1Q5T2W1 519 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 HBMQ6B0K9 141 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 ZNF474Q6S9Z5 364 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-203ENST00000525013 SPNS3Q6ZMD2 512 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 ESPNLQ6ZVH7 1005 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 LRRC34Q8IZ02 419 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 LILRA2Q8N149 483 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 OR2V1Q8NHB1 315 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 OR51I1Q9H343 314 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 CCM2LQ9NUG4 571 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-203ENST00000525013 EXD2Q9NVH0 621 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 PAQR5Q9NXK6 330 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-203ENST00000525013 CLEC4AQ9UMR7 237 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 PROCRQ9UNN8 238 aa16.65■□□□□ 0.26
CAPN1-203ENST00000525013 A0A0J9YW62 118 aa16.64■□□□□ 0.25
CAPN1-203ENST00000525013 GOLGA8QA0A0J9YX86 632 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms