RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 C9orf43Q8TAL5 461 aaPredicted RBP14.1□□□□□ -0.15
BEST1-204ENST00000524926 CRELD1Q96HD1 420 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 LMF1Q96S06 567 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 CDCA4Q9BXL8 241 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 C20orf141Q9NUB4 165 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 IL20Q9NYY1 176 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 MKL2Q9ULH7 1088 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 U3KQA8 63 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 IGKV3D-11A0A0A0MRZ8 115 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 PIPP12273 146 aaPredicted RBP14.1□□□□□ -0.15
BEST1-204ENST00000524926 RORAP35398 523 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 PSMD4P55036 377 aaKnown RBP14.1□□□□□ -0.15
BEST1-204ENST00000524926 IRF3Q14653 427 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 MED22Q15528 200 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 YOD1Q5VVQ6 348 aaPredicted RBP14.1□□□□□ -0.15
BEST1-204ENST00000524926 MED25Q71SY5 747 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 ZBTB46Q86UZ6 589 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 CDK20Q8IZL9 346 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 CADM2Q8N3J6 435 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 SLC2A12Q8TD20 617 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 NECAB3Q96P71 396 aaPredicted RBP14.1□□□□□ -0.15
BEST1-204ENST00000524926 TEX12Q9BXU0 123 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 PRRG3Q9BZD7 231 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 EVA1AQ9H8M9 152 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 ATP13A2Q9NQ11 1180 aa14.1□□□□□ -0.15
BEST1-204ENST00000524926 ADAMTS9Q9P2N4 1935 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 PATE3B3GLJ2 98 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 NPIPB9F8W1W9 429 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 LYPD3O95274 346 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 CDK4P11802 303 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 FUT1P19526 365 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 ACAA2P42765 397 aaKnown RBP14.09□□□□□ -0.15
BEST1-204ENST00000524926 VBP1P61758 197 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 EFNB1P98172 346 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 RHAGQ02094 409 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 NDUFAF6Q330K2 333 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 ZNF620Q6ZNG0 422 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 TMEM163Q8TC26 289 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 TMEM80Q96HE8 168 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 ZNF582Q96NG8 517 aaPredicted RBP14.09□□□□□ -0.15
BEST1-204ENST00000524926 SLC46A1Q96NT5 459 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 OR6C1Q96RD1 312 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 FLRT3Q9NZU0 649 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 MED31Q9Y3C7 131 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 TNRC6BQ9UPQ9 1833 aaKnown RBP14.09□□□□□ -0.15
BEST1-204ENST00000524926 A0A1B0GWA3 101 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 POLR1CO15160 346 aaPredicted RBP14.09□□□□□ -0.15
BEST1-204ENST00000524926 CSTAP01040 98 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 TGFBR2P37173 567 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 EFNA3P52797 238 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 ACY1Q03154 408 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 NCF4Q15080 339 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 ELAVL1Q15717 326 aaKnown RBP14.09□□□□□ -0.15
BEST1-204ENST00000524926 ARMCX4Q5H9R4 360 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 SLC25A30Q5SVS4 291 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 SHISA6Q6ZSJ9 500 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 ZNF550Q7Z398 422 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 SLC34A3Q8N130 599 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 OR4Q3Q8NH05 313 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 PLEKHA8Q96JA3 519 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 SAMD8Q96LT4 415 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 GAL3ST4Q96RP7 486 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 BCL7BQ9BQE9 202 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 TRIM2Q9C040 744 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 SIDT1Q9NXL6 827 aaKnown RBP14.09□□□□□ -0.15
BEST1-204ENST00000524926 ZNF223Q9UK11 482 aaPredicted RBP14.09□□□□□ -0.15
BEST1-204ENST00000524926 CFL2Q9Y281 166 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 CDH10Q9Y6N8 788 aa14.09□□□□□ -0.15
BEST1-204ENST00000524926 A0A0B4J2E0 115 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.08□□□□□ -0.16
BEST1-204ENST00000524926 A0A1B0GX12 115 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 TCRBV16S1A1N1A0A5B0 115 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 SERINC4A6NH21 518 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 UNC119BA6NIH7 251 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 SLC22A1O15245 554 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 HPGDP15428 266 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 MAKP20794 623 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 PPICP45877 212 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.08□□□□□ -0.16
BEST1-204ENST00000524926 ALG10BQ5I7T1 473 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 HSDL2Q6YN16 418 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 PRR23CQ6ZRP0 262 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 CYP4Z2PQ8N1L4 340 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 ZSCAN1Q8NBB4 408 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 ZNF721Q8TF20 911 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 RPL3LQ92901 407 aaKnown RBP14.08□□□□□ -0.16
BEST1-204ENST00000524926 BPIFA2Q96DR5 249 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 OR5M11Q96RB7 305 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 VN1R1Q9GZP7 353 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 NXF5Q9H1B4 397 aaKnown RBP14.08□□□□□ -0.16
BEST1-204ENST00000524926 LRRN3Q9H3W5 708 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 MKKSQ9NPJ1 570 aaPredicted RBP14.08□□□□□ -0.16
BEST1-204ENST00000524926 CTSFQ9UBX1 484 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 SRPK3Q9UPE1 567 aa14.08□□□□□ -0.16
BEST1-204ENST00000524926 M0R3G1 203 aa14.07□□□□□ -0.16
BEST1-204ENST00000524926 CHP2O43745 196 aa14.07□□□□□ -0.16
BEST1-204ENST00000524926 DDAH2O95865 285 aa14.07□□□□□ -0.16
BEST1-204ENST00000524926 SAGP10523 405 aaPredicted RBP14.07□□□□□ -0.16
BEST1-204ENST00000524926 CSTF2P33240 577 aaKnown RBP eCLIP14.07□□□□□ -0.16
BEST1-204ENST00000524926 PRKCDQ05655 676 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms