RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 LNX2Q8N448 690 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 FLVCR1-AS1Q8TAF5 88 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 DOK4Q8TEW6 326 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 KISS1RQ969F8 398 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-228ENST00000524023 FAM131CQ96AQ9 280 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TBX5Q99593 518 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 SLX1AQ9BQ83 275 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 HCAR1Q9BXC0 346 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 SRMSQ9H3Y6 488 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 ATP13A2Q9NQ11 1180 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 TMEM74BQ9NUR3 256 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 KLHL21Q9UJP4 597 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 SLC22A7Q9Y694 548 aa10.29□□□□□ -0.76
HDAC9-228ENST00000524023 POM121BA6NF01 834 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 TTC36A6NLP5 189 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 HRO43593 1189 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 CTSVO60911 334 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 TRIM3O75382 744 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 STX11O75558 287 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 CHRNB1P11230 501 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 NID1P14543 1247 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 BMP7P18075 431 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 KIR2DL1P43626 348 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 ID2Q02363 134 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 ADAM15Q13444 863 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 GALEQ14376 348 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 Q5BKY6 102 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 EXOSC6Q5RKV6 272 aaKnown RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 DCST2Q5T1A1 773 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 MRPL2Q5T653 305 aaKnown RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 IDNKQ5T6J7 187 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 OR1E3Q8WZA6 343 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 SLC22A18Q96BI1 424 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 UPRTQ96BW1 309 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 UBL7Q96S82 380 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 KXD1Q9BQD3 176 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 MARVELD1Q9BSK0 173 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 SLA2Q9H6Q3 261 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 ADAP2Q9NPF8 381 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 FBXO34Q9NWN3 711 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 CLDND1Q9NY35 253 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 KCNE5Q9UJ90 142 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 XIRP2A4UGR9 3374 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 TRBV23OR9-2A0A075B6M9 112 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 NPIPA5A0A0B4J1W7 369 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 DAPL1A0PJW8 107 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 ANKRD34BA5PLL1 514 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 CDHR4A6H8M9 788 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 OR6C70A6NIJ9 312 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 NPIPA7E9PJI5 369 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 K7EQS6 105 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 PEX12O00623 359 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 RCBTB2O95199 551 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 NPIPA8P0DM63 369 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 INPP1P49441 399 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 PPP2CBP62714 309 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 PPP2CAP67775 309 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 CSTF1Q05048 431 aaKnown RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 DBPQ10586 325 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 KLHL12Q53G59 568 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 YIF1BQ5BJH7 314 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 C1QTNF12Q5T7M4 302 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 TIGD3Q6B0B8 471 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 HBMQ6B0K9 141 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 ENPP7Q6UWV6 458 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 THSD4Q6ZMP0 1018 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 LIX1LQ8IVB5 337 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 YIPF7Q8N8F6 280 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 OR5W2Q8NH69 310 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 PTP4A1Q93096 173 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 AHCYL2Q96HN2 611 aaKnown RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 PPIL3Q9H2H8 161 aaKnown RBP10.28□□□□□ -0.76
HDAC9-228ENST00000524023 TRIM36Q9NQ86 728 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 PRDM9Q9NQV7 894 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 CMC2Q9NRP2 79 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 EXTL2Q9UBQ6 330 aa10.28□□□□□ -0.76
HDAC9-228ENST00000524023 A0A0G2JMP0 313 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 LOC102723532A0A0G2JNH3 316 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 A0A0X1KG70 313 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 FAM86C2PA6NEL3 165 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 URADA6NGE7 173 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 SLC22A31A6NKX4 558 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 TNFSF14O43557 240 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 SLC43A1O75387 559 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 REM1O75628 298 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 LAMP2P13473 410 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 SHC1P29353 583 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 GDI1P31150 447 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 FOXK2Q01167 660 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 EFR3AQ14156 821 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 KIR2DS3Q14952 304 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 ITPRIPL2Q3MIP1 535 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 PRRT3Q5FWE3 981 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 GARNL3Q5VVW2 1013 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF57Q68EA5 555 aaPredicted RBP10.27□□□□□ -0.77
HDAC9-228ENST00000524023 FCRL6Q6DN72 434 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 RPL13AP3Q6NVV1 102 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 TMPRSS11FQ6ZWK6 438 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 RD3Q7Z3Z2 195 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 SLC37A3Q8NCC5 494 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms