RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	PEMT	Q9UBM1	199 aa		4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	SEC14L3	Q9UDX4	400 aa		4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	KL	Q9UEF7	1012 aa		4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	UBQLN2	Q9UHD9	624 aa		4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	STAP1	Q9ULZ2	295 aa		4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	WBP11	Q9Y2W2	641 aa	Known RBP	4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	OR51B4	Q9Y5P0	310 aa		4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	CPAMD8	Q8IZJ3	1885 aa		4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	MALRD1	Q5VYJ5	2156 aa		4.7	□□□□□ -1.66
PABPC1-223	ENST00000523636	DSCAM	O60469	2012 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ZNF701	M0R085	212 aa	Predicted RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ANKRD28	O15084	1053 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SNN	O75324	88 aa	Predicted RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	WBP4	O75554	376 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SERPINI2	O75830	405 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	EML2	O95834	649 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	TNF	P01375	233 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ANKRD34C	P0C6C1	535 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	STAG3L2	P0CL84	134 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	G6PD	P11413	515 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	LYL1	P12980	280 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CYP11B1	P15538	503 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CD58	P19256	250 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	TCN1	P20061	433 aa	Predicted RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ITGAL	P20701	1170 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	NR4A1	P22736	598 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	TIA1	P31483	386 aa	Known RBP eCLIP	4.69	□□□□□ -1.66	2e-21	■□□□□ 11
PABPC1-223	ENST00000523636	COIL	P38432	576 aa	Predicted RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	MMP13	P45452	471 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	NSF	P46459	744 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	GDI2	P50395	445 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	HNRNPF	P52597	415 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	PLK1	P53350	603 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	GPX6	P59796	221 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	MAGOH	P61326	146 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	YWHAE	P62258	255 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	FOXE3	Q13461	319 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	PDK3	Q15120	406 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CYP1B1	Q16678	543 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	RGS21	Q2M5E4	152 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ZNF750	Q32MQ0	723 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ACCSL	Q4AC99	568 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	LRRC73	Q5JTD7	316 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SAPCD1	Q5SSQ6	148 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CLVS2	Q5SYC1	327 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	NCR3LG1	Q68D85	454 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CLEC6A	Q6EIG7	209 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SCYL2	Q6P3W7	929 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	TTC27	Q6P3X3	843 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	BZW1	Q7L1Q6	419 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	MRGPRE	Q86SM8	312 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	MEX3D	Q86XN8	651 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	FAM219A	Q8IW50	185 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ARHGEF19	Q8IW93	802 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	PELI3	Q8N2H9	469 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	MAPK1IP1L	Q8NDC0	245 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CPEB3	Q8NE35	698 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	TRPV3	Q8NET8	790 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SGMS2	Q8NHU3	365 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SUN3	Q8TAQ9	357 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	PHF10	Q8WUB8	498 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SLCO2A1	Q92959	643 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ZNF583	Q96ND8	569 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	PANX1	Q96RD7	426 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	GPA33	Q99795	319 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CBWD1	Q9BRT8	395 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	FEM1A	Q9BSK4	669 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	APOO	Q9BUR5	198 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ABHD6	Q9BV23	337 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	RGCC	Q9H4X1	137 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	AUNIP	Q9H7T9	357 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	MED20	Q9H944	212 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	C20orf141	Q9NUB4	165 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	PDP1	Q9P0J1	537 aa	Predicted RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	TAAR2	Q9P1P5	351 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	ABI3	Q9P2A4	366 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	MGAT4C	Q9UBM8	478 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	CNOT8	Q9UFF9	292 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	NOCT	Q9UK39	431 aa	Known RBP	4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	TMCO1	Q9UM00	188 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	SNX24	Q9Y343	169 aa		4.69	□□□□□ -1.66
PABPC1-223	ENST00000523636	LOC105369274	A0A096LPK9	316 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	LOC102723532	A0A0G2JNH3	316 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636		A0A0U1RQV5	110 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	C1orf232	A0A0U1RR37	186 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	GXYLT2	A0PJZ3	443 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	TMEM247	A6NEH6	219 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	HAT1	O14929	419 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	TRIAP1	O43715	76 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	PRAMEF2	O60811	474 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	CDH16	O75309	829 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	ALOX12B	O75342	701 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	ZFPL1	O95159	310 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	C9	P02748	559 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	ERBB2	P04626	1255 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	PAEP	P09466	180 aa		4.68	□□□□□ -1.66
PABPC1-223	ENST00000523636	ALOX5	P09917	674 aa		4.68	□□□□□ -1.66

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