RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 C2orf80Q0P641 193 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 MLC1Q15049 377 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 TECRLQ5HYJ1 363 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 C9orf135Q5VTT2 229 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 TMEM108Q6UXF1 575 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 LRRC8AQ8IWT6 810 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 DEPDC4Q8N2C3 294 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 RFLNBQ8N5W9 214 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 C3orf56Q8N813 242 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 ANKS4BQ8N8V4 417 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 OR4C3Q8NH37 302 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 ZBTB8AQ96BR9 441 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 ERP27Q96DN0 273 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 DNAJA3Q96EY1 480 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 CHMP6Q96FZ7 201 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 APIPQ96GX9 242 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF300Q96RE9 604 aaPredicted RBP10.26□□□□□ -0.77
SDCBP-211ENST00000523441 VRK1Q99986 396 aaPredicted RBP10.26□□□□□ -0.77
SDCBP-211ENST00000523441 TRMOQ9BU70 441 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 GRIP2Q9C0E4 1043 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 MCM8Q9UJA3 840 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 PMF1-BGLAPU3KQ54 211 aa10.26□□□□□ -0.77
SDCBP-211ENST00000523441 MANBAO00462 879 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 DHRS4L1P0CG22 281 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 PSMA4P25789 261 aaKnown RBP10.25□□□□□ -0.77
SDCBP-211ENST00000523441 NR4A2P43354 598 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 OR3A2P47893 321 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 PRIM2P49643 509 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 CHRNB3Q05901 458 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 ACSM2AQ08AH3 577 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 CALCOCO2Q13137 446 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 HEPACAMQ14CZ8 416 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 TEX35Q5T0J7 233 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 ACSM2BQ68CK6 577 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 KLHL17Q6TDP4 642 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 Q6ZT83 130 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 ZAR1Q86SH2 424 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 SAMD14Q8IZD0 417 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-211ENST00000523441 RFWD2Q8NHY2 731 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 FBXO27Q8NI29 283 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 CPNE4Q96A23 557 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-211ENST00000523441 BRF2Q9HAW0 419 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 C3orf14Q9HBI5 128 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 MIEF1Q9NQG6 463 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 METRNQ9UJH8 293 aa10.25□□□□□ -0.77
SDCBP-211ENST00000523441 C19orf53Q9UNZ5 99 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-211ENST00000523441 IGLV3-32A0A0A0MS00 114 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 NPIPA5A0A0B4J1W7 369 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 OR5H1A6NKK0 313 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 NPIPA7E9PJI5 369 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 H7C417 338 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 VENTXO95231 258 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 OTCP00480 354 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 ANXA4P09525 319 aaPredicted RBP10.24□□□□□ -0.77
SDCBP-211ENST00000523441 CSF3P09919 207 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 NPIPA8P0DM63 369 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 BMP4P12644 408 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 CREB1P16220 341 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 CD40P25942 277 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 HMOX2P30519 316 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 NTSP30990 170 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 GPC1P35052 558 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 HTR6P50406 440 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 MANFP55145 182 aaKnown RBP10.24□□□□□ -0.77
SDCBP-211ENST00000523441 RASGEF1BQ0VAM2 473 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 HSPB3Q12988 150 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 SPDYAQ5MJ70 313 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 TIMM23BQ5SRD1 257 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 CCNJQ5T5M9 372 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 TRABD2AQ86V40 505 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 TDRPQ86YL5 185 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 MMGT1Q8N4V1 131 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 B4GALNT2Q8NHY0 566 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 PHOSPHO1Q8TCT1 267 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 GPR78Q96P69 363 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 SORCS2Q96PQ0 1159 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 GLIPR2Q9H4G4 154 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 MYNNQ9NPC7 610 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 GIN1Q9NXP7 522 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 MGAT4BQ9UQ53 548 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 FKBP7Q9Y680 259 aa10.24□□□□□ -0.77
SDCBP-211ENST00000523441 MYO1GB0I1T2 1018 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF195O14628 629 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 OIP5O43482 229 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 EFNA2O43921 213 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 SLC7A1P30825 629 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 TIA1P31483 386 aaKnown RBP eCLIP10.23□□□□□ -0.77
SDCBP-211ENST00000523441 IL2RGP31785 369 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 STX2P32856 288 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 SLC29A2Q14542 456 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 CD226Q15762 336 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 NDUFAF6Q330K2 333 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 GGTA1PQ4G0N0 100 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 GLE1Q53GS7 698 aaKnown RBP10.23□□□□□ -0.77
SDCBP-211ENST00000523441 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF551Q7Z340 670 aaPredicted RBP10.23□□□□□ -0.77
SDCBP-211ENST00000523441 SLC46A3Q7Z3Q1 461 aa10.23□□□□□ -0.77
SDCBP-211ENST00000523441 LSRQ86X29 649 aaPredicted RBP10.23□□□□□ -0.77
SDCBP-211ENST00000523441 ZNF433Q8N7K0 673 aaPredicted RBP10.23□□□□□ -0.77
SDCBP-211ENST00000523441 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms