RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SCML2Q9UQR0 700 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 FBXO7Q9Y3I1 522 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 PCDHA9Q9Y5H5 950 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 WNT6Q9Y6F9 365 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 A3GALT2U3KPV4 340 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 U3KQ87 197 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 THADAQ6YHU6 1953 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 NEMP2A6NFY4 417 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 EIF1AYO14602 144 aaKnown RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 IMPA2O14732 288 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ARPC3O15145 178 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 HCRTO43612 131 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 CPNE3O75131 537 aaKnown RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TULP3O75386 442 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 PIAS1O75925 651 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TM7SF2O76062 418 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 DDAH2O95865 285 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 MT-CYBP00156 380 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 EGFP01133 1207 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ERCC1P07992 297 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 G6PDP11413 515 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ADH5P11766 374 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 HLA-EP13747 358 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 AREGP15514 252 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 EPORP19235 508 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 BCKDHBP21953 392 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 UQCRC2P22695 453 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 FMO3P31513 532 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 OPRL1P41146 370 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TNFRSF4P43489 277 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 PRKAA2P54646 552 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 DNAJB13P59910 316 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 GNA12Q03113 381 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 RING1Q06587 406 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TUBB3Q13509 450 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 FASTKQ14296 549 aaKnown RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 OR8G1Q15617 311 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TBCCQ15814 346 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 CCDC157Q569K6 752 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 SIRPB2Q5JXA9 342 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 AVPI1Q5T686 147 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TTC23Q5W5X9 447 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 PLET1Q6UQ28 207 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 NPNTQ6UXI9 565 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 THSD4Q6ZMP0 1018 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 DPY19L2P2Q6ZN68 376 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 SHFQ7M4L6 423 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 GDF7Q7Z4P5 450 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 LYG2Q86SG7 212 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ACOT1Q86TX2 421 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 SLC26A11Q86WA9 606 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF100Q8IYN0 542 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 MFSD4AQ8N468 514 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF655Q8N720 491 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF383Q8NA42 475 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 NECAP1Q8NC96 275 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TTC16Q8NEE8 873 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TSTD1Q8NFU3 115 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 STXBP6Q8NFX7 210 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 RHOXF1Q8NHV9 184 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 RPLP0P6Q8NHW5 317 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 SUN3Q8TAQ9 357 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 PHOSPHO1Q8TCT1 267 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 PHF10Q8WUB8 498 aaKnown RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 DIO2Q92813 273 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 BCL2L2Q92843 193 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 GCDHQ92947 438 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 HGDQ93099 445 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ERGIC1Q969X5 290 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ZBTB8AQ96BR9 441 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM56Q96MV1 263 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 PRAP1Q96NZ9 151 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 COL21A1Q96P44 957 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 DCLRE1CQ96SD1 692 aaKnown RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ABHD1Q96SE0 405 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 PRMT1Q99873 361 aaKnown RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 NDUFAF3Q9BU61 184 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ROGDIQ9GZN7 287 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 RDH8Q9NYR8 311 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 ARMCX3Q9UH62 379 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 MMP17Q9ULZ9 603 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 SNX12Q9UMY4 172 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 STUB1Q9UNE7 303 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 UBE2J1Q9Y385 318 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 RHBDD3Q9Y3P4 386 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 HEMK1Q9Y5R4 338 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-216ENST00000523088 KCNMB2Q9Y691 235 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM56-RWDD3S4R434 201 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 WDR87Q6ZQQ6 2873 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 PI4KAP42356 2102 aa7.03□□□□□ -1.28
HDAC3-216ENST00000523088 CEP192Q8TEP8 1941 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 DNAH14Q0VDD8 3507 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 FAM240BA0A1B0GVZ2 78 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 RPS10-NUDT3A0A1W2PQS6 291 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 SLC22A23A1A5C7 686 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 OTOL1A6NHN0 477 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-216ENST00000523088 GLOD5A6NK44 160 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 TMX2-CTNND1H3BSU7 103 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 DFFAO00273 331 aa7.02□□□□□ -1.29
HDAC3-216ENST00000523088 BTN3A3O00478 584 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms