RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 PXT1Q8NFP0 134 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 OR4D9Q8NGE8 314 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 SMIM4Q8WVI0 70 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 HMGB4Q8WW32 186 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 KAT2AQ92830 837 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 ECHDC3Q96DC8 303 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 C10orf90Q96M02 699 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 TBX5Q99593 518 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 TEX12Q9BXU0 123 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 MAN2C1Q9NTJ4 1040 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 EDARQ9UNE0 448 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 DENND4AQ7Z401 1863 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 A0A0G2JK05 382 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 PQLC2LA1A4F0 135 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 FAM25EA8MYX2 175 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 H0YC42 278 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 K7ERQ8 282 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 ITGA10O75578 1167 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 OR2A4O95047 310 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 HIST1H2ABP04908 130 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 PAICSP22234 425 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 BDH1Q02338 343 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 TSTA3Q13630 321 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 MELKQ14680 651 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 TMEM44Q2T9K0 475 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 TMEM255AQ5JRV8 349 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 AADACL4Q5VUY2 407 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 ZNF660Q6AZW8 331 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 FAM71E1Q6IPT2 247 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 NHLRC1Q6VVB1 395 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 HIST3H2AQ7L7L0 130 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 MRGPREQ86SM8 312 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 MMP21Q8N119 569 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 OR6V1Q8N148 313 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 CPXM2Q8N436 756 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 HDDC3Q8N4P3 179 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 SIRT6Q8N6T7 355 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 RELL2Q8NC24 303 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 FAM98AQ8NCA5 519 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 OR10K1Q8NGX5 313 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 HAVCR2Q8TDQ0 301 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 GANCQ8TET4 914 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 HIST1H2ACQ93077 130 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 RGMAQ96B86 450 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 OR2A7Q96R45 310 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 TREX2Q9BQ50 279 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 TMEM106CQ9BVX2 250 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 NOX3Q9HBY0 568 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 TRIM36Q9NQ86 728 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 EXOGQ9Y2C4 368 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 PLXND1Q9Y4D7 1925 aa8.97□□□□□ -0.97
CTNNA1-230ENST00000521724 OR2M5A3KFT3 312 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 HMSDA8MTL9 139 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 CACNB4O00305 520 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 ADAM12O43184 909 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 IL3P08700 152 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 H2AFB1P0C5Y9 115 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 TRIM23P36406 574 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 ATP5C1P36542 298 aaKnown RBP8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 CCR9P51686 369 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 MANFP55145 182 aaKnown RBP8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 AP1S1P61966 158 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 OC90Q02509 493 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 SLC3A1Q07837 685 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 CNTN1Q12860 1018 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 UBXN2BQ14CS0 331 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 HFEQ30201 348 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 HAGHLQ6PII5 290 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 LRRN1Q6UXK5 716 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 SERPINA13PQ6UXR4 307 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 LINGO2Q7L985 606 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 TAS1R1Q7RTX1 841 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 COMTD1Q86VU5 262 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 TMEM17Q86X19 198 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 ACBD7Q8N6N7 88 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 OR6T1Q8NGN1 323 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 OR5W2Q8NH69 310 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 SLC22A8Q8TCC7 542 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 NEIL2Q969S2 332 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 NEURL3Q96EH8 262 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 UROC1Q96N76 676 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 ALG8Q9BVK2 526 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 SEMA4CQ9C0C4 833 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 OR51I1Q9H343 314 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 GPN1Q9HCN4 374 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 HRASLSQ9HDD0 168 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 MYNNQ9NPC7 610 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 NANSQ9NR45 359 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 CAMK2AQ9UQM7 478 aa8.96□□□□□ -0.97
CTNNA1-230ENST00000521724 A0A087WUU8 490 aa8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 YKT6O15498 198 aa8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 GSTZ1O43708 216 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 PRAMEF2O60811 474 aa8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 MTX2O75431 263 aa8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 RLN2P04090 185 aa8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 SAGP10523 405 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 PVALBP20472 110 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 TBXA2RP21731 343 aa8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 HTR1FP30939 366 aa8.96□□□□□ -0.98
CTNNA1-230ENST00000521724 CDKN3Q16667 212 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms