RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 RIPK2O43353 540 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 RGS14O43566 566 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 SOD3P08294 240 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 ALOX5P09917 674 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 LINGO3P0C6S8 592 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 DANCRP0C864 163 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 ADH6P28332 368 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 SFTPDP35247 375 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 FRKP42685 505 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-204ENST00000521331 PRIM2P49643 509 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 DNAJB13P59910 316 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 P2RY6Q15077 328 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 DUSP5Q16690 384 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 ZNF672Q499Z4 452 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-204ENST00000521331 SFRP5Q5T4F7 317 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 ANKRD26P1Q6NSI1 321 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 DNAJC14Q6Y2X3 702 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-204ENST00000521331 MTERF4Q7Z6M4 381 aaKnown RBP13.25□□□□□ -0.29
PRKDC-204ENST00000521331 ZAR1Q86SH2 424 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 CEP112Q8N8E3 955 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 SLC16A11Q8NCK7 471 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 LILRB1Q8NHL6 650 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-204ENST00000521331 FBXO30Q8TB52 745 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 SMAP2Q8WU79 429 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-204ENST00000521331 KISS1RQ969F8 398 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-204ENST00000521331 C1orf109Q9NX04 203 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 SH3BP4Q9P0V3 963 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 EMCNQ9ULC0 261 aa13.25□□□□□ -0.29
PRKDC-204ENST00000521331 KIF2AO00139 706 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-204ENST00000521331 TLX2O43763 284 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-204ENST00000521331 GLRA3O75311 464 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 PRKD3O94806 890 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 IFNA2P01563 188 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 NEFHP12036 1026 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 DDX5P17844 614 aaKnown RBP13.24□□□□□ -0.29
PRKDC-204ENST00000521331 FOXF1Q12946 379 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 PDE7AQ13946 482 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 TAB1Q15750 504 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 CD226Q15762 336 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 CCDC153Q494R4 210 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 ZNF385BQ569K4 471 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 FCRLAQ7L513 359 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 TDRPQ86YL5 185 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 ZNF527Q8NB42 609 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 MAPK1IP1LQ8NDC0 245 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 FCRL1Q96LA6 429 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 BTBD2Q9BX70 525 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 POTEKPQ9BYX7 375 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 L2HGDHQ9H9P8 463 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 TNFRSF12AQ9NP84 129 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 DUSP22Q9NRW4 184 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 GPC6Q9Y625 555 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-204ENST00000521331 RTTNQ86VV8 2226 aa13.24□□□□□ -0.29
PRKDC-204ENST00000521331 HEATR5AQ86XA9 2040 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 MXRA5Q9NR99 2828 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 A0A1W2PP18 115 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 H3BNH8 94 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 ZNF195O14628 629 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 AKAP10O43572 662 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 PROCP04070 461 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 YES1P07947 543 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 SDC1P18827 310 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 SUMO3P55854 103 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-204ENST00000521331 POU6F2P78424 691 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-204ENST00000521331 ZNF117Q03924 483 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 ITGADQ13349 1161 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 EXOSC6Q5RKV6 272 aaKnown RBP13.23□□□□□ -0.29
PRKDC-204ENST00000521331 SSX8Q7RTT4 187 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 NUFIP2Q7Z417 695 aaKnown RBP13.23□□□□□ -0.29
PRKDC-204ENST00000521331 SLC43A2Q8N370 569 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 BANPQ8N9N5 519 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 PIWIL2Q8TC59 973 aaKnown RBP13.23□□□□□ -0.29
PRKDC-204ENST00000521331 PHOSPHO1Q8TCT1 267 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 MZB1Q8WU39 189 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 JADE3Q92613 823 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 MTERF3Q96E29 417 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 TSSK3Q96PN8 268 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 STACQ99469 402 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 KLHDC3Q9BQ90 382 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 SRXN1Q9BYN0 137 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 HOXD1Q9GZZ0 328 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 SLCO5A1Q9H2Y9 848 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 BARX1Q9HBU1 254 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-204ENST00000521331 GIN1Q9NXP7 522 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 LIPT1Q9Y234 373 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 TMED5Q9Y3A6 229 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 MAGED1Q9Y5V3 778 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-204ENST00000521331 ACTL7BQ9Y614 415 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 PCNX3Q9H6A9 2034 aa13.23□□□□□ -0.29
PRKDC-204ENST00000521331 CD5LO43866 347 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 NUDT14O95848 222 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 ADAP00813 363 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 THBS1P07996 1170 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 ATP6V1C1P21283 382 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 SHC1P29353 583 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 ACVR1BP36896 505 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 CDKN1AP38936 164 aa13.22□□□□□ -0.29
PRKDC-204ENST00000521331 ASMTP46597 345 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms