RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ZBTB8AQ96BR9 441 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 ROPN1LQ96C74 230 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 ITCHQ96J02 903 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 UCN2Q96RP3 112 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 NPDC1Q9NQX5 325 aaPredicted RBP18.64■□□□□ 0.57
TRIM35-203ENST00000521253 CLCF1Q9UBD9 225 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 PCNX3Q9H6A9 2034 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 TEX15Q9BXT5 2789 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 UQCRHLA0A096LP55 91 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 C7orf72A4D263 438 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 SERINC4A6NH21 518 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 GTPBP1O00178 669 aaKnown RBP18.63■□□□□ 0.57
TRIM35-203ENST00000521253 SEC14L5O43304 696 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 KIAA0513O60268 411 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 UGT2B17O75795 530 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 GUSBP08236 651 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 BMP5P22003 454 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 SUCLG1P53597 346 aaKnown RBP18.63■□□□□ 0.57
TRIM35-203ENST00000521253 SLC25A35Q3KQZ1 300 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 GTDC1Q4AE62 458 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 COX20Q5RI15 118 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 FRRS1Q6ZNA5 592 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 FUNDC1Q8IVP5 155 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 MEIOBQ8N635 442 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 ACBD4Q8NC06 268 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 SMPDL3BQ92485 455 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 WNT2BQ93097 391 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 DCTN4Q9UJW0 460 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 ICAM5Q9UMF0 924 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 WDR45Q9Y484 360 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 AP4B1Q9Y6B7 739 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 PKDREJQ9NTG1 2253 aa18.63■□□□□ 0.57
TRIM35-203ENST00000521253 KIAA1549Q9HCM3 1950 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 ANP32DO95626 131 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 KRT75O95678 551 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 LINGO3P0C6S8 592 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 ZCCHC18P0CG32 403 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 PSMA4P25789 261 aaKnown RBP18.62■□□□□ 0.57
TRIM35-203ENST00000521253 ANXA11P50995 505 aaKnown RBP18.62■□□□□ 0.57
TRIM35-203ENST00000521253 P2RX1P51575 399 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 CLDN20P56880 219 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 TXNL4AP83876 142 aaKnown RBP18.62■□□□□ 0.57
TRIM35-203ENST00000521253 MAPK14Q16539 360 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 GPAT3Q53EU6 434 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 C6orf10Q5SRN2 563 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 AP1ARQ63HQ0 302 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 POMZP3Q6PJE2 187 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 SLC2A7Q6PXP3 512 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 RELL2Q8NC24 303 aaPredicted RBP18.62■□□□□ 0.57
TRIM35-203ENST00000521253 RFWD2Q8NHY2 731 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 POC1BQ8TC44 478 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 STON2Q8WXE9 905 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 GTF2H4Q92759 462 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 SAP130Q9H0E3 1048 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 ENKD1Q9H0I2 346 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 NPHS2Q9NP85 383 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 POLE3Q9NRF9 147 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 CCDC167Q9P0B6 97 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 FBN2P35556 2912 aa18.62■□□□□ 0.57
TRIM35-203ENST00000521253 ABCA12Q86UK0 2595 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 ARHGAP21Q5T5U3 1957 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 DVL2O14641 736 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF264O43296 627 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 H6PDO95479 791 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 NUDT14O95848 222 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 UBL4AP11441 157 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 PRF1P14222 555 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 IGFBP2P18065 325 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 ATP4BP51164 291 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 MVDP53602 400 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 SUMO3P55854 103 aaPredicted RBP18.61■□□□□ 0.57
TRIM35-203ENST00000521253 EEFSECP57772 596 aaKnown RBP18.61■□□□□ 0.57
TRIM35-203ENST00000521253 HPCAP84074 193 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 CHRNEQ04844 493 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 SYPL1Q16563 259 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 BLOC1S3Q6QNY0 202 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 GRAMD2AQ8IUY3 354 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF619Q8N2I2 560 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 ANKFN1Q8N957 763 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 ZG16BQ96DA0 208 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 AURKBQ96GD4 344 aaPredicted RBP18.61■□□□□ 0.57
TRIM35-203ENST00000521253 RNF145Q96MT1 663 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 TRNT1Q96Q11 434 aaKnown RBP18.61■□□□□ 0.57
TRIM35-203ENST00000521253 TM9SF2Q99805 663 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 SPOCK3Q9BQ16 436 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 TPT1P8Q9HAU6 139 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF629Q9UEG4 869 aaPredicted RBP18.61■□□□□ 0.57
TRIM35-203ENST00000521253 LIPT1Q9Y234 373 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 L3MBTL1Q9Y468 752 aa18.61■□□□□ 0.57
TRIM35-203ENST00000521253 NR5A2O00482 541 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 EIF4E2O60573 245 aaKnown RBP18.6■□□□□ 0.57
TRIM35-203ENST00000521253 RCBTB2O95199 551 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 TGM6O95932 706 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 TMIGD3P0DMS9 266 aaPredicted RBP18.6■□□□□ 0.57
TRIM35-203ENST00000521253 CTSSP25774 331 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 AGFG1P52594 562 aaKnown RBP18.6■□□□□ 0.57
TRIM35-203ENST00000521253 FOXF1Q12946 379 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 SKP2Q13309 424 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 SQLEQ14534 574 aa18.6■□□□□ 0.57
TRIM35-203ENST00000521253 TOMM34Q15785 309 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms