RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 CCDC115Q96NT0 180 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 SDF2Q99470 211 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 ZBTB18Q99592 522 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 WDR55Q9H6Y2 383 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 EXD2Q9NVH0 621 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 CLCF1Q9UBD9 225 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 KCNN3Q9UGI6 736 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 GPR45Q9Y5Y3 372 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 KCNE3Q9Y6H6 103 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 POLQO75417 2590 aa9.4□□□□□ -0.9
TRAPPC9-209ENST00000521167 CCDC168Q8NDH2 2452 aa9.4□□□□□ -0.91
TRAPPC9-209ENST00000521167 TACC2O95359 2948 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 GOLGA8QA0A0J9YX86 632 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 RNF103-CHMP3A0A140T963 221 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 C7orf72A4D263 438 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 GOLGA8OA6NCC3 632 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 NPIPB9F8W1W9 429 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 GOLGA8NF8WBI6 632 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 H3BNH8 94 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 ZNF195O14628 629 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 POLR3GO15318 223 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 TNFRSF21O75509 655 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 TGDSO95455 350 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 CRHP06850 196 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 TMIGD3P0DMS9 266 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 IDO1P14902 403 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 ZNF17P17021 662 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 CAPN3P20807 821 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 BMP5P22003 454 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 DGKQP52824 942 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 GYS2P54840 703 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 DLX5P56178 289 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 RPS3AP61247 264 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 TXNL4AP83876 142 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 GSTA3Q16772 222 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 ARHGAP11BQ3KRB8 267 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 FAM174BQ3ZCQ3 159 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 FLYWCH1Q4VC44 716 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 PDCD4Q53EL6 469 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 KLHL26Q53HC5 615 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 NXNQ6DKJ4 435 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 OR2A2Q6IF42 318 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 ARSKQ6UWY0 536 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 GTPBP8Q8N3Z3 284 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 TRIML2Q8N7C3 387 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 C9orf106Q8NAJ2 232 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 RELL2Q8NC24 303 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 PHOSPHO1Q8TCT1 267 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 OIT3Q8WWZ8 545 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 RNASE6Q93091 150 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 NEURL3Q96EH8 262 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 C7orf26Q96N11 449 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 SFXN3Q9BWM7 321 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 NMUR2Q9GZQ4 415 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 JKAMPQ9P055 326 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 MARCOQ9UEW3 520 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 DTNAQ9Y4J8 743 aa9.39□□□□□ -0.91
TRAPPC9-209ENST00000521167 UBDO15205 165 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 EIF4E2O60573 245 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 STX11O75558 287 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 IL6P05231 212 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 PGRP06401 933 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 TCEA1P23193 301 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 IL12AP29459 219 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 EIF1P41567 113 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 MAGEA8P43361 318 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 ZNF41P51814 821 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 SUCLG1P53597 346 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 SUMO3P55854 103 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 NME5P56597 212 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 CLDN15P56746 228 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 RAC1P63000 192 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 ZNF141Q15928 474 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 SLC9B1Q4ZJI4 515 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 ATAD3BQ5T9A4 648 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 SAXO2Q658L1 398 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 HEPHL1Q6MZM0 1159 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 EPGNQ6UW88 154 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 P4HA3Q7Z4N8 544 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 ANKRD46Q86W74 232 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 GRAMD2AQ8IUY3 354 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 METTL25Q8N6Q8 603 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 GATSQ8NAP1 163 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 OR5D16Q8NGK9 328 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 TEX37Q96LM6 180 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 OR52E6Q96RD3 313 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 OR51I1Q9H343 314 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 PIGMQ9H3S5 423 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 SERHL2Q9H4I8 314 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 MCCC2Q9HCC0 563 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 POLE3Q9NRF9 147 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 MED17Q9NVC6 651 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 PAQR5Q9NXK6 330 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 ZIM2Q9NZV7 527 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 VDAC3Q9Y277 283 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 ZNF175Q9Y473 711 aa9.38□□□□□ -0.91
TRAPPC9-209ENST00000521167 PDZD2O15018 2839 aa9.37□□□□□ -0.91
TRAPPC9-209ENST00000521167 FREM1Q5H8C1 2179 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms