RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 LRIT1Q9P2V4 623 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 C19orf53Q9UNZ5 99 aaPredicted RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 YARS2Q9Y2Z4 477 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 KLK4Q9Y5K2 254 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 C4orf51C9J302 202 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 MCIDASD6RGH6 385 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 SCO2O43819 266 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 GALR3O60755 368 aaPredicted RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 PRAMEF2O60811 474 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ERGP11308 486 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 TNFSF8P32971 234 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ETV5P41161 510 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ETV1P50549 477 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 RAB38P57729 211 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 BTG2P78543 158 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 RHAGQ02094 409 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 MBOAT2Q6ZWT7 520 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 TMEM151BQ8IW70 566 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 SGTBQ96EQ0 304 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 DMRTB1Q96MA1 342 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 FOXQ1Q9C009 403 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 HHATLQ9HCP6 504 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 SRA1Q9HD15 236 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 FBXO34Q9NWN3 711 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 LAMA2P24043 3122 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 TCF20Q9UGU0 1960 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 SPAG17Q6Q759 2223 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 UNC13CQ8NB66 2214 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 CENPXA8MT69 81 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 C11orf98E9PRG8 122 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 GPX5O75715 221 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 UPK1BO75841 260 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 SCG5P05408 212 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 CLEC2LP0C7M8 214 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 PRKAR1AP10644 381 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 SLC2A2P11168 524 aaPredicted RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 TRHRP34981 398 aaPredicted RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 MAGEA8P43361 318 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 EMP3P54852 163 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 KCNAB1Q14722 419 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 MLC1Q15049 377 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 FAM83FQ8NEG4 500 aaPredicted RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 SDR9C7Q8NEX9 313 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 ADOQ96SZ5 270 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 SLITRK2Q9H156 845 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 SACM1LQ9NTJ5 587 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 IER3IP1Q9Y5U9 82 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 KNTC1P50748 2209 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 SPTY2D1-AS1A0A0U1RR47 76 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 ZC3H12DA2A288 527 aaKnown RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 PSMD9O00233 223 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 NDUFB5O43674 189 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 TBX6O95947 436 aaPredicted RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 GBX2P52951 348 aaPredicted RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 RELAQ04206 551 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 DBPQ10586 325 aaPredicted RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 MLLT11Q13015 90 aaPredicted RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 AGERQ15109 404 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 GXYLT1Q4G148 440 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 MINDY2Q8NBR6 621 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 ZNF248Q8NDW4 579 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 OR51Q1Q8NH59 317 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 C5orf34Q96MH7 638 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 TNFRSF13CQ96RJ3 184 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 ALG8Q9BVK2 526 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 UBQLN3Q9H347 655 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 POLR1DQ9Y2S0 133 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 GMEB1Q9Y692 573 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 METTL15A6NJ78 407 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 TAF4O00268 1085 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 SRPX2O60687 465 aaPredicted RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 SEMG1P04279 462 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 EDNRAP25101 427 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 RPS19P39019 145 aaKnown RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 TGM4P49221 684 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 RPS25P62851 125 aaKnown RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 NDUFAF6Q330K2 333 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 LCN1P1Q5VSP4 162 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 C1orf94Q6P1W5 598 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 DHRS4L2Q6PKH6 230 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 SLC29A4Q7RTT9 530 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 NANOGNBQ7Z5D8 188 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 CEACAM19Q7Z692 300 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 TSEN54Q7Z6J9 526 aaKnown RBP9.44□□□□□ -0.9
MCF2-209ENST00000520602 SIX5Q8N196 739 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 OR6C4Q8NGE1 309 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 CDCA4Q9BXL8 241 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 LYRM4Q9HD34 91 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 FAM60AQ9NP50 221 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 TRPV5Q9NQA5 729 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 NKIRAS2Q9NYR9 191 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 MKL2Q9ULH7 1088 aa9.44□□□□□ -0.9
MCF2-209ENST00000520602 A0A1B0GWA3 101 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 PRAMEF27A3QJZ7 478 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 SLC22A31A6NKX4 558 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 A8MV72 311 aaPredicted RBP9.43□□□□□ -0.9
MCF2-209ENST00000520602 AQP9O43315 295 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 SLC35E2P0CK97 266 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 PSKH1P11801 424 aa9.43□□□□□ -0.9
MCF2-209ENST00000520602 NID1P14543 1247 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms