RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 LRRC34Q8IZ02 419 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 SLC7A5P1Q8MH63 180 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 COX18Q8N8Q8 333 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 GATSQ8NAP1 163 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 OR56A1Q8NGH5 318 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 OR5AK3PQ8NH89 298 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 LINC01560Q8TB33 94 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 POC1BQ8TC44 478 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 ACTRT2Q8TDY3 377 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 LZICQ8WZA0 190 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 ZNF524Q96C55 264 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 PPP1R14BQ96C90 147 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 STARD4Q96DR4 205 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 ZFP3Q96NJ6 502 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 OR7D2Q96RA2 312 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 SDF2Q99470 211 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 PIGQQ9BRB3 760 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 HOXD1Q9GZZ0 328 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 SERHL2Q9H4I8 314 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 THAP1Q9NVV9 213 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 FOXD3Q9UJU5 478 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 FAF1Q9UNN5 650 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 VDAC3Q9Y277 283 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 AP4B1Q9Y6B7 739 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 MED12LQ86YW9 2145 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 DOCK7Q96N67 2140 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 ITPR2Q14571 2701 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 CREBBPQ92793 2442 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 NPIPB9F8W1W9 429 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 H3BML4 177 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 OIP5O43482 229 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 TNFSF13O75888 250 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 CPSF4O95639 269 aaKnown RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 C1QCP02747 245 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 OPN1LWP04000 364 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 ALDOCP09972 364 aaKnown RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 POU3F2P20265 443 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 KIR2DL2P43627 348 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 ATP12AP54707 1039 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 EEFSECP57772 596 aaKnown RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 ARPC4P59998 168 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 UFM1P61960 85 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 EEF1A1P68104 462 aaKnown RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 MYBPHQ13203 477 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 DAZAP2Q15038 168 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 DCST2Q5T1A1 773 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 EEF1A1P5Q5VTE0 462 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 OGFOD2Q6N063 350 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 ALKBH2Q6NS38 261 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 CBLN3Q6UW01 205 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 CHMP1BQ7LBR1 199 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 OLIG3Q7RTU3 272 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 BTLAQ7Z6A9 289 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 GGNQ86UU5 652 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 GRAMD2AQ8IUY3 354 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 ZZZ3Q8IYH5 903 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 KIRREL3Q8IZU9 778 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 GCNT2Q8N0V5 402 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 MEIOBQ8N635 442 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 CHDHQ8NE62 594 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 OR5D16Q8NGK9 328 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 PHOSPHO1Q8TCT1 267 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 SFXN5Q8TD22 340 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 MGARPQ8TDB4 240 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 JADE3Q92613 823 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 SLC35B4Q969S0 331 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 ARL8AQ96BM9 186 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 TESCQ96BS2 214 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 MOAP1Q96BY2 351 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 CHMP6Q96FZ7 201 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 ZNF845Q96IR2 970 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 OSBPL10Q9BXB5 764 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 WDR55Q9H6Y2 383 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-215ENST00000519474 MANSC1Q9H8J5 431 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 BATF3Q9NR55 127 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 KCNE5Q9UJ90 142 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 PCDHGB4Q9UN71 923 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 GPR45Q9Y5Y3 372 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 CRYBG3Q68DQ2 2970 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 MAST4O15021 2626 aa8.41□□□□□ -1.06
HDAC3-215ENST00000519474 A0A087WZY1 265 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 A0A0J9YW62 118 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 LINC00854A0A1B0GVQ3 168 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 A0A1W2PNV4 684 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 DUXAA6NLW8 204 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 SCDO00767 359 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 ZNF195O14628 629 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 HDAC3O15379 428 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 AHCYL1O43865 530 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 FCMRO60667 390 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 B3GALNT1O75752 331 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 AQP8O94778 261 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 CGAP01215 116 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 CRHP06850 196 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 KRT16P08779 473 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 LINGO3P0C6S8 592 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 OR12D1P0DN82 309 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms