RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 CASP9P55211 416 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 PCBP3P57721 371 aaKnown RBP5.55□□□□□ -1.52
MRPS28-203ENST00000518371 PHC1P78364 1004 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 LRRC74AQ0VAA2 488 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 STX5Q13190 355 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 KIR3DS1Q14943 382 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 EIPR1Q53HC9 387 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 CCNJQ5T5M9 372 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 FNDC7Q5VTL7 733 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 TMEM211Q6ICI0 200 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 ZNF585AQ6P3V2 769 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 FGD2Q7Z6J4 655 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 YRDCQ86U90 279 aaKnown RBP5.55□□□□□ -1.52
MRPS28-203ENST00000518371 MARCH3Q86UD3 253 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 CLEC4FQ8N1N0 589 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 TRIML2Q8N7C3 387 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 OR4K17Q8NGC6 315 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 OR5M9Q8NGP3 310 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 OR10Q1Q8NGQ4 319 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 OR14L1PQ8NHC6 308 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 PSMA8Q8TAA3 256 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 NEIL3Q8TAT5 605 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 DUSP19Q8WTR2 217 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 HOXB13Q92826 284 aaPredicted RBP5.55□□□□□ -1.52
MRPS28-203ENST00000518371 CDS1Q92903 461 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 MAP6Q96JE9 813 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 SLC35G5Q96KT7 338 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 TEX37Q96LM6 180 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 OR7D2Q96RA2 312 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 PANX1Q96RD7 426 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 STACQ99469 402 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 EBF4Q9BQW3 602 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 HOXD1Q9GZZ0 328 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 TP63Q9H3D4 680 aaPredicted RBP5.55□□□□□ -1.52
MRPS28-203ENST00000518371 DSN1Q9H410 356 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 ZNF703Q9H7S9 590 aaPredicted RBP5.55□□□□□ -1.52
MRPS28-203ENST00000518371 PTGES2Q9H7Z7 377 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 RMND5AQ9H871 391 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 MED4Q9NPJ6 270 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 SERHLQ9NQF3 203 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 DUSP22Q9NRW4 184 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 EXD2Q9NVH0 621 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 FAM120CQ9NX05 1096 aaKnown RBP5.55□□□□□ -1.52
MRPS28-203ENST00000518371 GIN1Q9NXP7 522 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 ZIM2Q9NZV7 527 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 MED11Q9P086 117 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 TNFRSF10DQ9UBN6 386 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 BTNL2Q9UIR0 455 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 DKKL1Q9UK85 242 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 C15orf41Q9Y2V0 281 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 MEMO1Q9Y316 297 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 SLC6A5Q9Y345 797 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 WIF1Q9Y5W5 379 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 LIPGQ9Y5X9 500 aa5.55□□□□□ -1.52
MRPS28-203ENST00000518371 SMG1Q96Q15 3661 aaKnown RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 ZGRF1Q86YA3 2104 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 A1L4Q6 167 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 FAM234BA2RU67 622 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 WIPF3A6NGB9 483 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 E9PLN8 166 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 SCDO00767 359 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 RFXANKO14593 260 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 GMFGO60234 142 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 EDF1O60869 148 aaKnown RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 KRT75O95678 551 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 ANGPTL1O95841 491 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 AGR2O95994 175 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 HPNP05981 417 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 VIMP08670 466 aaKnown RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 HOXD4P09016 255 aaPredicted RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 OR12D1P0DN82 309 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 TROVE2P10155 538 aaKnown RBP eCLIP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 HK1P19367 917 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 TBXA2RP21731 343 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 TCEA1P23193 301 aaKnown RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 DPP4P27487 766 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 LCN1P31025 176 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 SRD5A2P31213 254 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 ANXA11P50995 505 aaKnown RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 POLR2JP52435 117 aaKnown RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 C17orf67Q0P5P2 114 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 SF3B4Q15427 424 aaKnown RBP eCLIP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 GRAMD1BQ3KR37 738 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 C6orf10Q5SRN2 563 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 DCST2Q5T1A1 773 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 ATAD3BQ5T9A4 648 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 TNFAIP8L2Q6P589 184 aaPredicted RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 ENPP6Q6UWR7 440 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 C16orf62Q7Z3J2 963 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 MRGPRGQ86SM5 289 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 CHERPQ8IWX8 916 aaKnown RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 WDSUB1Q8N9V3 476 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 GATSQ8NAP1 163 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 FAM83FQ8NEG4 500 aaPredicted RBP5.54□□□□□ -1.52
MRPS28-203ENST00000518371 OR5D16Q8NGK9 328 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 OR4C3Q8NH37 302 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 FAM110BQ8TC76 370 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 XAGE5Q8WWM1 108 aa5.54□□□□□ -1.52
MRPS28-203ENST00000518371 RAB8BQ92930 207 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms