RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CXorf49A8MYA2 514 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MYO1GB0I1T2 1018 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ISM1B1AKI9 464 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMLR1H3BR10 107 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 DVL1O14640 695 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC16A4O15374 487 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TLR5O60602 858 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SH3BGRLO75368 114 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 EEDO75530 441 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PCDH8O95206 1070 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 LSM8O95777 96 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CSTAP01040 98 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 GCGP01275 180 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ANXA1P04083 346 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SOD2P04179 222 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TCRBP04435 133 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 HIST1H2ABP04908 130 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 C8GP07360 202 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MMP3P08254 477 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CSH1P0DML2 217 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CSH2P0DML3 217 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TXNP10599 105 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF44P15621 663 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 RPA2P15927 270 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 FPR1P21462 350 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 NT5EP21589 574 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 GPX3P22352 226 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SSTR2P30874 369 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 OTX1P32242 354 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 GGT2P36268 569 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 DCTP40126 519 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRRX1P54821 245 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 KLF3P57682 345 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TAS2R40P59535 323 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 RPS20P60866 119 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SUMO1P63165 101 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 HTD2P86397 168 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SP3Q02447 781 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 DUSP8Q13202 625 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 IL18Q14116 193 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 IRF3Q14653 427 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC10A1Q14973 349 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 RAB11BQ15907 218 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 NTRK2Q16620 822 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MANEAQ5SRI9 462 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CERCAMQ5T4B2 595 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM244Q5VVB8 128 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 BSPRYQ5W0U4 402 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 JMJD6Q6NYC1 403 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 DNAJC24Q6P3W2 148 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC22A25Q6T423 547 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MOXD1Q6UVY6 613 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 LCLAT1Q6UWP7 414 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 GCNT7Q6ZNI0 430 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM179Q6ZVK1 233 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 GAREM2Q75VX8 874 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 HIST3H2AQ7L7L0 130 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 BHLHA15Q7RTS1 189 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SSX7Q7RTT5 188 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PXKQ7Z7A4 578 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CLEC14AQ86T13 490 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MYPOPQ86VE0 399 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC47A2Q86VL8 602 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 LAX1Q8IWV1 398 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAM126BQ8IXS8 530 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 NRSN1Q8IZ57 195 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PUSL1Q8N0Z8 303 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 DAW1Q8N136 415 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MTURNQ8N3F0 131 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 NKAPQ8N5F7 415 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZBTB2Q8N680 514 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 DCBLD1Q8N8Z6 715 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 GPR26Q8NDV2 337 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF248Q8NDW4 579 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ATP6V1C2Q8NEY4 427 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM185AQ8NFB2 350 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR11H7Q8NGC8 314 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR56B1Q8NGI3 324 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR4C15Q8NGM1 316 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 FIBINQ8TAL6 211 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CNIH3Q8TBE1 160 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TBCKQ8TEA7 893 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 STYXQ8WUJ0 223 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 C15orf40Q8WUR7 153 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC35F5Q8WV83 523 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 METTL21AQ8WXB1 218 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 HIST1H2ACQ93077 130 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 UPRTQ96BW1 309 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZBED6CLQ96FA7 236 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ELMOD3Q96FG2 381 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TPD52L3Q96J77 140 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAM210BQ96KR6 192 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CXorf58Q96LI9 332 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ADAD1Q96M93 576 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 C5orf34Q96MH7 638 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 NECTIN4Q96NY8 510 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PCYT2Q99447 389 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PARK7Q99497 189 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TEAD3Q99594 435 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PHB2Q99623 299 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms