RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 KCNS3Q9BQ31 491 aa4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 PSD2Q9BQI7 771 aa4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 NXF5Q9H1B4 397 aaKnown RBP4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 DCAF13Q9NV06 445 aaKnown RBP4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 TUBGCP4Q9UGJ1 667 aa4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 IKZF2Q9UKS7 526 aa4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 BARX2Q9UMQ3 279 aaPredicted RBP4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 NPIPA1Q9UND3 350 aa4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 MAD1L1Q9Y6D9 718 aa4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 NEURL4Q96JN8 1562 aa4.89□□□□□ -1.63
CTNNA1-202ENST00000517533 SYNJ2O15056 1496 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 A0A1W2PNV4 684 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 ATP6V0E1O15342 81 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 CLOCKO15516 846 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 TAPBPO15533 448 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 KDELR3O43731 214 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 PRKAB2O43741 272 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 RAMP3O60896 148 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 CDK2AP2O75956 126 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 DIRAS1O95057 198 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 CLDN9O95484 217 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 ANGPTL1O95841 491 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 S100A6P06703 90 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 DAOP14920 347 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 GYG1P46976 350 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 UQCRFS1P47985 274 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 CTAG1AP78358 180 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 NTHL1P78549 312 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 SRSF9Q13242 221 aaKnown RBP eCLIP4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 RIGQ13278 110 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 UBE2V2Q15819 145 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 HAGHQ16775 308 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 SNAI3Q3KNW1 292 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 HSP90AA4PQ58FG1 418 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 C6orf183Q5T699 404 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 DDI2Q5TDH0 399 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 TMEM207Q6UWW9 146 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 GCNT7Q6ZNI0 430 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 NDUFAF7Q7L592 441 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 FAM58AQ8N1B3 248 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 PROKR2Q8NFJ6 384 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 LRRC20Q8TCA0 184 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 NUDCD2Q8WVJ2 157 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 APOBEC4Q8WW27 367 aaKnown RBP4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 MED30Q96HR3 178 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 CPXM1Q96SM3 734 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 LPAR4Q99677 370 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 TMEM204Q9BSN7 226 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 MCRIP2Q9BUT9 160 aaKnown RBP4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 C1QTNF4Q9BXJ3 329 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 GAL3ST2Q9H3Q3 398 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 ANKRD19PQ9H560 264 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 NT5MQ9NPB1 228 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 CCNB1IP1Q9NPC3 277 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 IL26Q9NPH9 171 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 INPP5EQ9NRR6 644 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 MRPL39Q9NYK5 338 aaKnown RBP4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 STX18Q9P2W9 335 aaKnown RBP4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 ZNF221Q9UK13 617 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 POU2F3Q9UKI9 436 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 GAB2Q9UQC2 676 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 PPP2R2CQ9Y2T4 447 aa4.88□□□□□ -1.63
CTNNA1-202ENST00000517533 LRIT2A6NDA9 550 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 OR5H15A6NDH6 313 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 TUBAL3A6NHL2 446 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 HIP1O00291 1037 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 BMP15O95972 392 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 SERPINE2P07093 398 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 FRMD6-AS1P0C7T7 363 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 KITLGP21583 273 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 STOMP27105 288 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 GTF2E2P29084 291 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 SLC26A2P50443 739 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 POU3F1Q03052 451 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 KLRB1Q12918 225 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 SLC17A1Q14916 467 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 SLC25A52Q3SY17 297 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 FAM106AQ4KMX7 169 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 DMRTC1Q5HYR2 192 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 ATP1A1-AS1Q5TC04 95 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 TWF2Q6IBS0 349 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 OR52W1Q6IF63 320 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 NEPROQ6NW34 567 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 SASS6Q6UVJ0 657 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 ZNF771Q7L3S4 317 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 NIPA1Q7RTP0 329 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 CATSPERDQ86XM0 798 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 TRPV1Q8NER1 839 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 OR1L3Q8NH93 324 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 MAGEE2Q8TD90 523 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 CCDC12Q8WUD4 166 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 CACNG8Q8WXS5 425 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 NTNG2Q96CW9 530 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 SLC30A2Q9BRI3 323 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 OVOL2Q9BRP0 275 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 TMEM246Q9BRR3 403 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 UGT1A10Q9HAW8 530 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 UBE2TQ9NPD8 197 aaPredicted RBP4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 CD300AQ9UGN4 299 aa4.87□□□□□ -1.63
CTNNA1-202ENST00000517533 STAP1Q9ULZ2 295 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms