RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ANKRD49Q8WVL7 239 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 PYDC1Q8WXC3 89 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 UBE2E3Q969T4 207 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 MCUR1Q96AQ8 359 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 RHBDF1Q96CC6 855 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 NMD3Q96D46 503 aaKnown RBP2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 CCDC126Q96EE4 140 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 WDR34Q96EX3 536 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 MVB12AQ96EY5 273 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 LINGO1Q96FE5 620 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 TSNARE1Q96NA8 513 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 GPR78Q96P69 363 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 OR4F4Q96R69 305 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 PKP4Q99569 1192 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC30A3Q99726 388 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 MRPL57Q9BQC6 102 aaKnown RBP2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 EBF4Q9BQW3 602 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 HGH1Q9BTY7 390 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 YIPF2Q9BWQ6 316 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 MRPS26Q9BYN8 205 aaKnown RBP2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 KLHL4Q9C0H6 718 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 C20orf27Q9GZN8 174 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF385DQ9H6B1 395 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 NT5DC2Q9H857 520 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 CALHM2Q9HA72 323 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 TIMMDC1Q9NPL8 285 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 CCDC177Q9NQR7 707 aaPredicted RBP2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC6A13Q9NSD5 602 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 TBCCD1Q9NVR7 557 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 RHBDL2Q9NX52 303 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 QPCTLQ9NXS2 382 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 ELOVL5Q9NYP7 299 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 NUDT4Q9NZJ9 180 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 NDUFA13Q9P0J0 144 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 STOX2Q9P2F5 926 aaPredicted RBP2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 PTBP2Q9UKA9 531 aaKnown RBP2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 EMCNQ9ULC0 261 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 TDRKHQ9Y2W6 561 aaKnown RBP2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 RNF11Q9Y3C5 154 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 FKBP7Q9Y680 259 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 CFAP20Q9Y6A4 193 aaKnown RBP2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 KCNE2Q9Y6J6 123 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 MAU2Q9Y6X3 613 aa2.76□□□□□ -1.97
SCARNA13-201ENST00000516672 hCG_2014768A0A024R1R8 64 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 IGHV3-20A0A0C4DH32 117 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 A0A0G2JMM0 328 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PRSS51A0A1B0GVH4 220 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 A0A1W2PPB8 328 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 A0A1W2PRS3 328 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TRBC2A0A5B9 178 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 URADA6NGE7 173 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 KIR3DP1A8MWS1 328 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 ISM1B1AKI9 464 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TRIM49D1C9J1S8 452 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 STX16-NPEPL1H3BU86 382 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 GOLGA8RI6L899 631 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 K7EPI3 171 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 STX16O14662 325 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PIP5K1BO14986 540 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 H2AFYO75367 372 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 DEAF1O75398 565 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SERPINB7O75635 380 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 STK16O75716 305 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CIB2O75838 187 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TNFSF13O75888 250 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 RCBTB2O95199 551 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PGM3O95394 542 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 DUS4LO95620 317 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 S100BP04271 92 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 HEXBP07686 556 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 BPGMP07738 259 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SERPINA6P08185 405 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 C1GALT1C1LP0DN25 315 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 MTHFD2P13995 350 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 IDO1P14902 403 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PPP3CBP16298 524 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 EPB42P16452 691 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PCSK2P16519 638 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CDH2P19022 906 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SAT1P21673 171 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PRDX6P30041 224 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PEBP1P30086 187 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CRHR1P34998 444 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SERPINB5P36952 375 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 HNF4AP41235 474 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 RPL5P46777 297 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 ERFP50548 548 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PRKAA2P54646 552 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 GAS1P54826 345 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SH3BGRP55822 239 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 DNAJB13P59910 316 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TBPL1P62380 186 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SKP1P63208 163 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC25A3Q00325 362 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 EGR3Q06889 387 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 NAE1Q13564 534 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 LAPTM5Q13571 262 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 FAM53BQ14153 422 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CSHL1Q14406 222 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms