RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 INHBCP55103 352 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 FOXC1Q12948 553 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 GPR50Q13585 617 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 NFATC4Q14934 902 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 PIP5KL1Q5T9C9 394 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 OR4N2Q8NGD1 307 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 STK35Q8TDR2 534 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 GAB3Q8WWW8 586 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 PINK1Q9BXM7 581 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 TMEM59LQ9UK28 342 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 FGF3P11487 239 aaPredicted RBP10.36□□□□□ -0.75
TRIM41-209ENST00000515834 MTNR1AP48039 350 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 SFRP5Q5T4F7 317 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 CCNJQ5T5M9 372 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 VASNQ6EMK4 673 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 MFSD6LQ8IWD5 586 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 BBS1Q8NFJ9 593 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 HSD17B8Q92506 261 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 SLC6A17Q9H1V8 727 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 HRASLSQ9HDD0 168 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 DNMT3BQ9UBC3 853 aaKnown RBP10.36□□□□□ -0.75
TRIM41-209ENST00000515834 A6NHS1 94 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 B4DXG7 233 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 MMP2P08253 660 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 FDXRP22570 491 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 GJA4P35212 333 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 EFNA3P52797 238 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 EXOSC6Q5RKV6 272 aaKnown RBP10.36□□□□□ -0.75
TRIM41-209ENST00000515834 DPPA4Q7L190 304 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 ADIPOR2Q86V24 386 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 SIAH1Q8IUQ4 282 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 NAGSQ8N159 534 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 NPWQ8N729 165 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 PSMF1Q92530 271 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 FRZBQ92765 325 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 UCN3Q969E3 161 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 ZUFSPQ96AP4 578 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 DTD2Q96FN9 168 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 SLC25A18Q9H1K4 315 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 DMRT3Q9NQL9 472 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 MAB21L2Q9Y586 359 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 CSNK1G3Q9Y6M4 447 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 XRN1Q8IZH2 1706 aaKnown RBP10.36□□□□□ -0.75
TRIM41-209ENST00000515834 DVL2O14641 736 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 TBX10O75333 385 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 HTR3AP46098 478 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 NEIL2Q969S2 332 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 C3orf49Q96BT1 292 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 OSBPL7Q9BZF2 842 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 CLDN8P56748 225 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 PCBD1P61457 104 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 POU3F1Q03052 451 aaPredicted RBP10.36□□□□□ -0.75
TRIM41-209ENST00000515834 KRBOX4Q5JUW0 171 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 SGPP2Q8IWX5 399 aa10.36□□□□□ -0.75
TRIM41-209ENST00000515834 ATP6AP1Q15904 470 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 PCGF3Q3KNV8 242 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 ZNF704Q6ZNC4 412 aaPredicted RBP10.35□□□□□ -0.75
TRIM41-209ENST00000515834 ESX1Q8N693 406 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 ZNF778Q96MU6 729 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SLC12A9Q9BXP2 914 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 GPR83Q9NYM4 423 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SLC35A3Q9Y2D2 325 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SPO11Q9Y5K1 396 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 EEDO75530 441 aaKnown RBP10.35□□□□□ -0.75
TRIM41-209ENST00000515834 TUSC2O75896 110 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 EGFP01133 1207 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 IGHG1P01857 330 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SLC2A1P11166 492 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SLC5A2P31639 672 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 ERVPABLB-1P60509 514 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 PIN1Q13526 163 aaPredicted RBP10.35□□□□□ -0.75
TRIM41-209ENST00000515834 P2RY14Q15391 338 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SSX2Q16385 188 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 LRRC26Q2I0M4 334 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 TMEM178AQ8NBL3 297 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 OR4K5Q8NGD3 323 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SLC6A18Q96N87 628 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 TMEM246Q9BRR3 403 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SUCNR1Q9BXA5 334 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 ZNF334Q9HCZ1 680 aaPredicted RBP10.35□□□□□ -0.75
TRIM41-209ENST00000515834 TESQ9UGI8 421 aaKnown RBP10.35□□□□□ -0.75
TRIM41-209ENST00000515834 TRAV27A0A087WT01 109 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 hCG_1809904A0A1W2PP81 198 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 A0A1W2PPE2 198 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 A0A1W2PR64 198 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 A0A1W2PRV1 198 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 KIAA0513O60268 411 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SLC16A7O60669 478 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 DDAH2O95865 285 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 AGTR1P30556 359 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 HTD2P86397 168 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SNTB2Q13425 540 aaKnown RBP10.35□□□□□ -0.75
TRIM41-209ENST00000515834 SPHARQ15513 63 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 STEAP4Q687X5 459 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 TMIEQ8NEW7 156 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 OR8J1Q8NGP2 316 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 STT3BQ8TCJ2 826 aa10.35□□□□□ -0.75
TRIM41-209ENST00000515834 TSPAN10Q9H1Z9 355 aaPredicted RBP10.35□□□□□ -0.75
TRIM41-209ENST00000515834 RIMS3Q9UJD0 308 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms