RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 SPATA5L1Q9BVQ7 753 aa10.82□□□□□ -0.68
SNF8-215ENST00000515572 QRSL1Q9H0R6 528 aaKnown RBP10.82□□□□□ -0.68
SNF8-215ENST00000515572 ARMC7Q9H6L4 198 aa10.82□□□□□ -0.68
SNF8-215ENST00000515572 EXOSC3Q9NQT5 275 aaKnown RBP10.82□□□□□ -0.68
SNF8-215ENST00000515572 NDE1Q9NXR1 346 aa10.82□□□□□ -0.68
SNF8-215ENST00000515572 TAS2R10Q9NYW0 307 aa10.82□□□□□ -0.68
SNF8-215ENST00000515572 ICAM5Q9UMF0 924 aa10.82□□□□□ -0.68
SNF8-215ENST00000515572 IFT52Q9Y366 437 aa10.82□□□□□ -0.68
SNF8-215ENST00000515572 ZNF407Q9C0G0 2248 aa10.82□□□□□ -0.68
SNF8-215ENST00000515572 GTF3C1Q12789 2109 aa10.82□□□□□ -0.68
SNF8-215ENST00000515572 CENPVL1A0A0U1RR11 272 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 C7orf72A4D263 438 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 C17orf51A8MQB3 221 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 B4DXG7 233 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 LINC01387J3KSC0 135 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 BCKDKO14874 412 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 SERPINB7O75635 380 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 WISP2O76076 250 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 ACTL6AO96019 429 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 ABOP16442 354 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 HK1P19367 917 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 GNLYP22749 145 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 PCGF2P35227 344 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 PTGS2P35354 604 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 PGM1P36871 562 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 GZMMP51124 257 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 CASP6P55212 293 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 MRPL49Q13405 166 aaKnown RBP10.81□□□□□ -0.68
SNF8-215ENST00000515572 CBFBQ13951 182 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 NHSL2Q5HYW2 709 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 RPS26P11Q5JNZ5 115 aaPredicted RBP10.81□□□□□ -0.68
SNF8-215ENST00000515572 WIPI1Q5MNZ9 446 aaPredicted RBP10.81□□□□□ -0.68
SNF8-215ENST00000515572 INTS11Q5TA45 600 aaKnown RBP10.81□□□□□ -0.68
SNF8-215ENST00000515572 RNF220Q5VTB9 566 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 Q6ZPB1 254 aaPredicted RBP10.81□□□□□ -0.68
SNF8-215ENST00000515572 CALHM3Q86XJ0 350 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 SPPL2CQ8IUH8 684 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 ZZZ3Q8IYH5 903 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 FAM71CQ8NEG0 241 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 OR52P1PQ8NH57 321 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 OR5W2Q8NH69 310 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 ZBTB8AQ96BR9 441 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 ARSGQ96EG1 525 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 SH3YL1Q96HL8 342 aaPredicted RBP10.81□□□□□ -0.68
SNF8-215ENST00000515572 LAT2Q9GZY6 243 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 SLC6A15Q9H2J7 730 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 ARL8BQ9NVJ2 186 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 PRDM4Q9UKN5 801 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 CARD8Q9Y2G2 431 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 ZNF835Q9Y2P0 537 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 LIPGQ9Y5X9 500 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 GPC6Q9Y625 555 aaPredicted RBP10.81□□□□□ -0.68
SNF8-215ENST00000515572 DNAJC13O75165 2243 aa10.81□□□□□ -0.68
SNF8-215ENST00000515572 HEATR5AQ86XA9 2040 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 CDHR4A6H8M9 788 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 PRORSD1PA6NEY8 169 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 FAM220BPB1ANY3 271 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 PRRG2O14669 202 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 ZIC3O60481 467 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 SLC19A2O60779 497 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 DNAJA2O60884 412 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 CYP7B1O75881 506 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 NUDT14O95848 222 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 PABPC4LP0CB38 370 aaKnown RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 UBTFL6P0CB48 400 aaPredicted RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 ESRRAP11474 423 aaPredicted RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 UQCRBP14927 111 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 ZNF17P17021 662 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 CHMP24386 653 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 EIF1P41567 113 aaKnown RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 SLC6A8P48029 635 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 CPA2P48052 419 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 SLC7A2P52569 658 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 PCBP3P57721 371 aaKnown RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 HSF1Q00613 529 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 SKP2Q13309 424 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 VEZF1Q14119 521 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 VMACQ2NL98 169 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 PLPPR5Q32ZL2 321 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 EIPR1Q53HC9 387 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 ZNF311Q5JNZ3 666 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 WLSQ5T9L3 541 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 AAGABQ6PD74 315 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 CBLN3Q6UW01 205 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 TRPM8Q7Z2W7 1104 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 PATL1Q86TB9 770 aaKnown RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 YRDCQ86U90 279 aaKnown RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 GRAMD2AQ8IUY3 354 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 CHERPQ8IWX8 916 aaKnown RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 SLC15A3Q8IY34 581 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 ZNF440Q8IYI8 595 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 TMCO5AQ8N6Q1 288 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 BHLHE22Q8NFJ8 381 aaPredicted RBP10.8□□□□□ -0.68
SNF8-215ENST00000515572 OR2T12Q8NG77 320 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 FAM57AQ8TBR7 257 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 NSL1Q96IY1 281 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 ZNF583Q96ND8 569 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 PIGQQ9BRB3 760 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 SPAG4Q9NPE6 437 aa10.8□□□□□ -0.68
SNF8-215ENST00000515572 ABCD2Q9UBJ2 740 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms