RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 KCNA10Q16322 511 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 FAM180BQ6P0A1 224 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 MED27Q6P2C8 311 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 MOB3CQ70IA8 216 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 GID4Q8IVV7 300 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 GJD3Q8N144 294 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 KLHDC9Q8NEP7 349 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 OR5W2Q8NH69 310 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 ABHD4Q8TB40 342 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 TRMT2BQ96GJ1 504 aaKnown RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 PPP1R16AQ96I34 528 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 CAMK1GQ96NX5 476 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 GPA33Q99795 319 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 CTPS2Q9NRF8 586 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 MYEF2Q9P2K5 600 aaKnown RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 NFKBIL1Q9UBC1 381 aaPredicted RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 FXYD6-FXYD2A0A087WZ82 144 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 CXCL11O14625 94 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 B4GALT3O60512 393 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 KHDRBS3O75525 346 aaKnown RBP11.97□□□□□ -0.49
SMAD1-215ENST00000515385 S100PP25815 95 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 ITGB8P26012 769 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 MPGP29372 298 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 RHOAP61586 193 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 FZD5Q13467 585 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 IL10RAQ13651 578 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 SMAD2Q15796 467 aaKnown RBP11.97□□□□□ -0.49
SMAD1-215ENST00000515385 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 TEX30Q5JUR7 227 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 UBE2NLQ5JXB2 153 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 SPOUT1Q5T280 376 aaKnown RBP11.97□□□□□ -0.49
SMAD1-215ENST00000515385 AVPI1Q5T686 147 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 SDHAF4Q5VUM1 108 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 COMMD6Q7Z4G1 85 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 GPR142Q7Z601 462 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 KRT78Q8N1N4 520 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 HDDC3Q8N4P3 179 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 TBC1D19Q8N5T2 526 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 OR5P2Q8WZ92 322 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 ECHDC3Q96DC8 303 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 ZDHHC12Q96GR4 267 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 TCEAL7Q9BRU2 100 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 PTDSS2Q9BVG9 487 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 FXYD6Q9H0Q3 95 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 CACYBPQ9HB71 228 aaKnown RBP11.97□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF334Q9HCZ1 680 aaPredicted RBP11.97□□□□□ -0.49
SMAD1-215ENST00000515385 MAN2C1Q9NTJ4 1040 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 SPHK1Q9NYA1 384 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 KLHL9Q9P2J3 617 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 RCE1Q9Y256 329 aa11.97□□□□□ -0.49
SMAD1-215ENST00000515385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.96□□□□□ -0.49
SMAD1-215ENST00000515385 F5H5P2 479 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 DVL2O14641 736 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 MT-ND5P03915 603 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 ATP1B1P05026 303 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 GLAP06280 429 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 CNR1P21554 472 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 DCDP81605 110 aaKnown RBP11.96□□□□□ -0.49
SMAD1-215ENST00000515385 ARF5P84085 180 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 E2F1Q01094 437 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 TUSC3Q13454 348 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 SLC25A35Q3KQZ1 300 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 NANPQ8TBE9 248 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 PHYHIPLQ96FC7 376 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 ALG8Q9BVK2 526 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
SMAD1-215ENST00000515385 CXorf36Q9H7Y0 433 aa11.96□□□□□ -0.49
SMAD1-215ENST00000515385 BARX1Q9HBU1 254 aaPredicted RBP11.96□□□□□ -0.49
SMAD1-215ENST00000515385 IGLV3-16A0A075B6K0 115 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 A0A0D9SG52 128 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 ANHXE9PGG2 379 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 LCMT2O60294 686 aaKnown RBP11.96□□□□□ -0.5
SMAD1-215ENST00000515385 EIF3GO75821 320 aaKnown RBP eCLIP11.96□□□□□ -0.5
SMAD1-215ENST00000515385 KRT33AO76009 404 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 NDUFB6O95139 128 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 SNAI1O95863 264 aaPredicted RBP11.96□□□□□ -0.5
SMAD1-215ENST00000515385 PAICSP22234 425 aaKnown RBP11.96□□□□□ -0.5
SMAD1-215ENST00000515385 MST1P26927 711 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 MRPL58Q14197 206 aaKnown RBP11.96□□□□□ -0.5
SMAD1-215ENST00000515385 CDKN3Q16667 212 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 TMEM255AQ5JRV8 349 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 PRAMEF19Q5SWL8 479 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.5
SMAD1-215ENST00000515385 ELP2Q6IA86 826 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 TPGS1Q6ZTW0 290 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 C15orf40Q8WUR7 153 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 TMEM68Q96MH6 324 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 FCRL4Q96PJ5 515 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 MFFQ9GZY8 342 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 OR51M1Q9H341 326 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 OR51I1Q9H343 314 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 ISG20L2Q9H9L3 353 aaKnown RBP11.96□□□□□ -0.5
SMAD1-215ENST00000515385 SIRT4Q9Y6E7 314 aaPredicted RBP11.96□□□□□ -0.5
SMAD1-215ENST00000515385 KIAA1671Q9BY89 1806 aa11.96□□□□□ -0.5
SMAD1-215ENST00000515385 TMEM218A2RU14 115 aa11.95□□□□□ -0.5
SMAD1-215ENST00000515385 CLDN7O95471 211 aa11.95□□□□□ -0.5
SMAD1-215ENST00000515385 CD160O95971 181 aa11.95□□□□□ -0.5
SMAD1-215ENST00000515385 HEXAP06865 529 aa11.95□□□□□ -0.5
SMAD1-215ENST00000515385 GP1BAP07359 652 aa11.95□□□□□ -0.5
SMAD1-215ENST00000515385 IL3P08700 152 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms