RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 PDSS1Q5T2R2 415 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 LRIG3Q6UXM1 1119 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 BEND4Q6ZU67 534 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 CDS1Q92903 461 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 STACQ99469 402 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 ACTR6Q9GZN1 396 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 PIGUQ9H490 435 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 FANCFQ9NPI8 374 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 GIMAP2Q9UG22 337 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 TRAF6Q9Y4K3 522 aa21.49■■□□□ 1.03
CCND3-221ENST00000514588 CSPG4Q6UVK1 2322 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 PIP5K1BO14986 540 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 SCAMP2O15127 329 aaKnown RBP21.48■■□□□ 1.03
CCND3-221ENST00000514588 PLAUP00749 431 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 NID1P14543 1247 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 HPCAL1P37235 193 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 EIF1P41567 113 aaKnown RBP21.48■■□□□ 1.03
CCND3-221ENST00000514588 CARD18P57730 90 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 ZNF117Q03924 483 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 STK32CQ86UX6 486 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 WFDC8Q8IUA0 241 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 OR7A2PQ8NGA2 310 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 ROBO4Q8WZ75 1007 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 CHMP6Q96FZ7 201 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 C12orf49Q9H741 205 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 GPR52Q9Y2T5 361 aa21.48■■□□□ 1.03
CCND3-221ENST00000514588 PRR14LQ5THK1 2151 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 OIP5O43482 229 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 EFNA2O43921 213 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 TUBBP07437 444 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 LAMP1P11279 417 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 PSMB1P20618 241 aaKnown RBP21.47■■□□□ 1.03
CCND3-221ENST00000514588 ALDH3A1P30838 453 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 SFTPDP35247 375 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 NR1H2P55055 460 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 FOXF1Q12946 379 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 ZNF239Q16600 458 aaKnown RBP21.47■■□□□ 1.03
CCND3-221ENST00000514588 ARL13AQ5H913 290 aaPredicted RBP21.47■■□□□ 1.03
CCND3-221ENST00000514588 PHOSPHO1Q8TCT1 267 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 RNF128Q8TEB7 428 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 PLPPR2Q96GM1 343 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 TMEM204Q9BSN7 226 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 MKS1Q9NXB0 559 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 GIN1Q9NXP7 522 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 SNX8Q9Y5X2 465 aa21.47■■□□□ 1.03
CCND3-221ENST00000514588 USF3Q68DE3 2245 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 TMEM114B3SHH9 223 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 NPHS1O60500 1241 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 PAX1P15863 534 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 DDX5P17844 614 aaKnown RBP21.46■■□□□ 1.03
CCND3-221ENST00000514588 ELK4P28324 431 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 RNF144AP50876 292 aaPredicted RBP21.46■■□□□ 1.03
CCND3-221ENST00000514588 ZNF844Q08AG5 666 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 KLHL26Q53HC5 615 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 GTF2IRD2BQ6EKJ0 949 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 CDC73Q6P1J9 531 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 CBLN3Q6UW01 205 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 MTERF4Q7Z6M4 381 aaKnown RBP21.46■■□□□ 1.03
CCND3-221ENST00000514588 GTF2IRD2Q86UP8 949 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 HOMEZQ8IX15 550 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 ABHD3Q8WU67 409 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 NUDT8Q8WV74 236 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 APOPT1Q96IL0 206 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 SRXN1Q9BYN0 137 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 OR10A4Q9H209 315 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 ICAM5Q9UMF0 924 aa21.46■■□□□ 1.03
CCND3-221ENST00000514588 ZANQ9Y493 2812 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 NPIPA5A0A0B4J1W7 369 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 NPIPA7E9PJI5 369 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 PEX11AO75192 247 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 PABPC4LP0CB38 370 aaKnown RBP21.45■■□□□ 1.02
CCND3-221ENST00000514588 NPIPA8P0DM63 369 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 ATP6V1C1P21283 382 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 MAPK1P28482 360 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 RPL3P39023 403 aaKnown RBP21.45■■□□□ 1.02
CCND3-221ENST00000514588 PTGR1Q14914 329 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 XKR7Q5GH72 579 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 BANPQ8N9N5 519 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 FBXO27Q8NI29 283 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 PSMA8Q8TAA3 256 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 TMEM171Q8WVE6 324 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 OR5P2Q8WZ92 322 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 PPP3R2Q96LZ3 170 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 MECRQ9BV79 373 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 ACTRT3Q9BYD9 372 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 CXorf36Q9H7Y0 433 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 ZNF701Q9NV72 531 aaPredicted RBP21.45■■□□□ 1.02
CCND3-221ENST00000514588 CARD8Q9Y2G2 431 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 KCNE3Q9Y6H6 103 aa21.45■■□□□ 1.02
CCND3-221ENST00000514588 HIVEP2P31629 2446 aa21.44■■□□□ 1.02
CCND3-221ENST00000514588 ZNF195O14628 629 aa21.44■■□□□ 1.02
CCND3-221ENST00000514588 HS3ST1O14792 307 aa21.44■■□□□ 1.02
CCND3-221ENST00000514588 CNOT4O95628 575 aaKnown RBP21.44■■□□□ 1.02
CCND3-221ENST00000514588 CCT3P49368 545 aaKnown RBP21.44■■□□□ 1.02
CCND3-221ENST00000514588 TP53BP2Q13625 1128 aa21.44■■□□□ 1.02
CCND3-221ENST00000514588 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.44■■□□□ 1.02
CCND3-221ENST00000514588 NUFIP2Q7Z417 695 aaKnown RBP21.44■■□□□ 1.02
CCND3-221ENST00000514588 ZNF611Q8N823 705 aa21.44■■□□□ 1.02
CCND3-221ENST00000514588 ZNF527Q8NB42 609 aa21.44■■□□□ 1.02
CCND3-221ENST00000514588 OR56A1Q8NGH5 318 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms