RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CGREF1Q99674 301 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 RUBCNLQ9H714 662 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 THUMPD1Q9NXG2 353 aaKnown RBP12.64□□□□□ -0.39
USP46-209ENST00000514536 ARMCX1Q9P291 453 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 FREM3P0C091 2139 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 LRRK2Q5S007 2527 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 OR2M5A3KFT3 312 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 TMEM247A6NEH6 219 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 EVPLLA8MZ36 301 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 AHRRA9YTQ3 701 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 ZNF264O43296 627 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 EIF4E2O60573 245 aaKnown RBP12.63□□□□□ -0.39
USP46-209ENST00000514536 CCDC22O60826 627 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 NUDT14O95848 222 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 CSTAP01040 98 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 BCHEP06276 602 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 UBL4AP11441 157 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 GABRA1P14867 456 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 ADH7P40394 386 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 P2RX1P51575 399 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 ZNF41P51814 821 aaPredicted RBP12.63□□□□□ -0.39
USP46-209ENST00000514536 CRISP3P54108 245 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 ADORA2A-AS1P86434 159 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 PMPCAQ10713 525 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 MMEL1Q495T6 779 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 TMEM211Q6ICI0 200 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 EIF3MQ7L2H7 374 aaKnown RBP12.63□□□□□ -0.39
USP46-209ENST00000514536 SNX32Q86XE0 403 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 PM20D2Q8IYS1 436 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 C10orf111Q8N326 155 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 MAL2Q969L2 176 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 TMEM19Q96HH6 336 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 ANKRD27Q96NW4 1050 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 NPAS1Q99742 590 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 PIGQQ9BRB3 760 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 CPPED1Q9BRF8 314 aaPredicted RBP12.63□□□□□ -0.39
USP46-209ENST00000514536 PRDM14Q9GZV8 571 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 LAT2Q9GZY6 243 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 IKZF5Q9H5V7 419 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.63□□□□□ -0.39
USP46-209ENST00000514536 MED17Q9NVC6 651 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 CALML5Q9NZT1 146 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 ICAM5Q9UMF0 924 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 ZNF337Q9Y3M9 751 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 L3MBTL1Q9Y468 752 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 FAM215AQ9Y5M1 114 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 GMEB1Q9Y692 573 aa12.63□□□□□ -0.39
USP46-209ENST00000514536 A0A087WZY1 265 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 AGAP5A6NIR3 686 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 CLDN24A6NM45 220 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 SNX3O60493 162 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 HOXD4P09016 255 aaPredicted RBP12.62□□□□□ -0.39
USP46-209ENST00000514536 UBTFL6P0CB48 400 aaPredicted RBP12.62□□□□□ -0.39
USP46-209ENST00000514536 BMP2P12643 396 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 CPN1P15169 458 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 GPX2P18283 190 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 LHX2P50458 406 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 KCNJ10P78508 379 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 CYLC2Q14093 348 aaPredicted RBP12.62□□□□□ -0.39
USP46-209ENST00000514536 FGFBP1Q14512 234 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 MAPRE2Q15555 327 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 PLPPR5Q32ZL2 321 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 RPS26P11Q5JNZ5 115 aaPredicted RBP12.62□□□□□ -0.39
USP46-209ENST00000514536 C1orf185Q5T7R7 199 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 B3GNT6Q6ZMB0 384 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 MRGPRGQ86SM5 289 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 MTDHQ86UE4 582 aaKnown RBP12.62□□□□□ -0.39
USP46-209ENST00000514536 TMCO5AQ8N6Q1 288 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 GPR119Q8TDV5 335 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 PHF10Q8WUB8 498 aaKnown RBP12.62□□□□□ -0.39
USP46-209ENST00000514536 OIT3Q8WWZ8 545 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 ARSGQ96EG1 525 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 TTYH2Q9BSA4 534 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 THUMPD3Q9BV44 507 aaKnown RBP12.62□□□□□ -0.39
USP46-209ENST00000514536 TRIM8Q9BZR9 551 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 A4GALTQ9NPC4 353 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 CORO2BQ9UQ03 480 aa12.62□□□□□ -0.39
USP46-209ENST00000514536 H3BML4 177 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 SLC22A2O15244 555 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 BCAS1O75363 584 aaPredicted RBP12.61□□□□□ -0.39
USP46-209ENST00000514536 IL7RP16871 459 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 POU3F2P20265 443 aaPredicted RBP12.61□□□□□ -0.39
USP46-209ENST00000514536 PGM1P36871 562 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 CCR4P51679 360 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 SMSP52788 366 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 SUMO3P55854 103 aaPredicted RBP12.61□□□□□ -0.39
USP46-209ENST00000514536 NUP107P57740 925 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 SELPLGQ14242 412 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 GNA13Q14344 377 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
USP46-209ENST00000514536 TOMM34Q15785 309 aaPredicted RBP12.61□□□□□ -0.39
USP46-209ENST00000514536 TMEM44Q2T9K0 475 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 GCNT6Q5T4J0 391 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 RPTNQ6XPR3 784 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 PEX5LQ8IYB4 626 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 POU5F2Q8N7G0 328 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 TOR1AIP2Q8NFQ8 470 aa12.61□□□□□ -0.39
USP46-209ENST00000514536 OR5W2Q8NH69 310 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms