RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 RIOK2Q9BVS4 552 aaKnown RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 TPT1P8Q9HAU6 139 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CRLS1Q9UJA2 301 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 TRMT6Q9UJA5 497 aaKnown RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 TRBV4-1A0A0J9YWV2 114 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PRSS38A1L453 326 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 DVL2O14641 736 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 SCAMP1O15126 338 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 SLC31A1O15431 190 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 LYRM1O43325 122 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PIAS2O75928 621 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PAK4O96013 591 aaPredicted RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 RPN2P04844 631 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PCCBP05166 539 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 APEX1P27695 318 aaKnown RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GDF5P43026 501 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GPR85P60893 370 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 POLR2GP62487 172 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 POU6F2P78424 691 aaPredicted RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 TP53BP2Q13625 1128 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 FZD2Q14332 565 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 SF1Q15637 639 aaKnown RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 TMPRSS11AQ6ZMR5 421 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PIP4P1Q86T03 277 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 OAFQ86UD1 273 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 OR52P1PQ8NH57 321 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 OR4C6Q8NH72 309 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GALNT9Q9HCQ5 603 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 SDHAF3Q9NRP4 125 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PHF11Q9UIL8 331 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 RALGAPA1Q6GYQ0 2036 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 SULT1B1O43704 296 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MELTFP08582 738 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ACP2P11117 423 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 CEACAM1P13688 526 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 CTSEP14091 401 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 CPN1P15169 458 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 AHCYP23526 432 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 UQCRC1P31930 480 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 DIO1P49895 249 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MICBQ29980 383 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 HLA-BQ31612 363 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 PABPC1L2AQ5JQF8 200 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MEX3BQ6ZN04 569 aaKnown RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 Q6ZVL8 140 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 VRK3Q8IV63 474 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 SLC30A8Q8IWU4 369 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 SPICQ8N5J4 248 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 OR13H1Q8NG92 308 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 OR8D4Q8NGM9 314 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 BAHD1Q8TBE0 780 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ADAMTS14Q8WXS8 1223 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 YIPF5Q969M3 257 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 TMEM159Q96B96 161 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 DMRTB1Q96MA1 342 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 HS6ST2Q96MM7 605 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ACAT2Q9BWD1 397 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 RBCK1Q9BYM8 510 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ENKD1Q9H0I2 346 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 REEP1Q9H902 201 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MCUBQ9NWR8 336 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 STMN3Q9NZ72 180 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ULK1O75385 1050 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 OR2B3O76000 313 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 PRAMEF1O95521 474 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 TGM6O95932 706 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 KRT8P05787 483 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 PPIBP23284 216 aaKnown RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 GPR3P46089 330 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 PIK3CGP48736 1102 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 PRLHRP49683 370 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 METAP1P53582 386 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 HBA1P69905 142 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MRPS15P82914 257 aaKnown RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 RAB40BQ12829 278 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 EXOSC2Q13868 293 aaKnown RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 RPS26P11Q5JNZ5 115 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 STPG1Q5TH74 334 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 CACHD1Q5VU97 1274 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MBOAT1Q6ZNC8 495 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 KRT73Q86Y46 540 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ATP6V1C2Q8NEY4 427 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 OR5M3Q8NGP4 307 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 SAP25Q8TEE9 199 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 DPEP2Q9H4A9 486 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 GAREM1Q9H706 876 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MYNNQ9NPC7 610 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 TM7SF3Q9NS93 570 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 APOBEC3BQ9UH17 382 aaKnown RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 UNC80Q8N2C7 3258 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 NCOR1O75376 2440 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 A0A1B0GVT2 93 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MEN1O00255 615 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 TNFSF14O43557 240 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 SOX30O94993 753 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 IGFBP1P08833 259 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 NPR2P20594 1047 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ACP1P24666 158 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms