RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 JUNP05412 331 aaKnown RBP9.63□□□□□ -0.87
DDX41-216ENST00000513562 RPS17P08708 135 aaKnown RBP9.63□□□□□ -0.87
DDX41-216ENST00000513562 HSD3B1P14060 373 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 ZNF23P17027 643 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 ENPP1P22413 925 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 HSD3B2P26439 372 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 GABRA3P34903 492 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 EIF1P41567 113 aaKnown RBP9.63□□□□□ -0.87
DDX41-216ENST00000513562 NCBP2P52298 156 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX41-216ENST00000513562 CHRNB3Q05901 458 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 FOXF1Q12946 379 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 NAB1Q13506 487 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 SLC29A2Q14542 456 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 PRSS53Q2L4Q9 553 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 GLE1Q53GS7 698 aaKnown RBP9.63□□□□□ -0.87
DDX41-216ENST00000513562 ARL13AQ5H913 290 aaPredicted RBP9.63□□□□□ -0.87
DDX41-216ENST00000513562 MROH9Q5TGP6 573 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 KLHL17Q6TDP4 642 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 RPS27LQ71UM5 84 aaKnown RBP9.63□□□□□ -0.87
DDX41-216ENST00000513562 GATSQ8NAP1 163 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 SEMA6DQ8NFY4 1073 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 FAM110BQ8TC76 370 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 C16orf78Q8WTQ4 265 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 PIK3R3Q92569 461 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 C3orf49Q96BT1 292 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 SOX7Q9BT81 388 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 DMGDHQ9UI17 866 aaKnown RBP9.63□□□□□ -0.87
DDX41-216ENST00000513562 ZNF225Q9UK10 706 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 TMCO1Q9UM00 188 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 SLC25A15Q9Y619 301 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 FKBP7Q9Y680 259 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX41-216ENST00000513562 PMF1-BGLAPU3KQ54 211 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 A0A0A6YYJ9 748 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 TTC36A6NLP5 189 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 GJE1A6NN92 205 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 SLCO1B7G3V0H7 640 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 EFNA2O43921 213 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 IFI6P09912 130 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 CHN1P15882 459 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 DDCP20711 480 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 STX2P32856 288 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 SRP14P37108 136 aaKnown RBP9.62□□□□□ -0.87
DDX41-216ENST00000513562 MAP3K8P41279 467 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 PRIM2P49643 509 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 ZNF83P51522 516 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 SPIN4Q56A73 249 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 GALNT18Q6P9A2 607 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 GAS2L3Q86XJ1 694 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 MISPQ8IVT2 679 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 PLD6Q8N2A8 252 aaKnown RBP9.62□□□□□ -0.87
DDX41-216ENST00000513562 ZNF433Q8N7K0 673 aaPredicted RBP9.62□□□□□ -0.87
DDX41-216ENST00000513562 OR52N5Q8NH56 324 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 ZNF483Q8TF39 744 aaPredicted RBP9.62□□□□□ -0.87
DDX41-216ENST00000513562 ZFP90Q8TF47 636 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 HOXB13Q92826 284 aaPredicted RBP9.62□□□□□ -0.87
DDX41-216ENST00000513562 ELP4Q96EB1 424 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 SH3YL1Q96HL8 342 aaPredicted RBP9.62□□□□□ -0.87
DDX41-216ENST00000513562 RNF14Q9UBS8 474 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 GRID1Q9ULK0 1009 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 NFU1Q9UMS0 254 aa9.62□□□□□ -0.87
DDX41-216ENST00000513562 IGHV3-15A0A0B4J1V0 119 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 LOC390937A0A1W2PQ73 354 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 ZNF724A8MTY0 619 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 KIF2AO00139 706 aaPredicted RBP9.61□□□□□ -0.87
DDX41-216ENST00000513562 MANBAO00462 879 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 RAD51DO75771 328 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 NKX2-2O95096 273 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 VENTXO95231 258 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 TCP1P17987 556 aaKnown RBP9.61□□□□□ -0.87
DDX41-216ENST00000513562 TSPAN8P19075 237 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 TIA1P31483 386 aaKnown RBP eCLIP9.61□□□□□ -0.87
DDX41-216ENST00000513562 GSTM5P46439 218 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 RAC3P60763 192 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 CD226Q15762 336 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 TMEM176BQ3YBM2 270 aaPredicted RBP9.61□□□□□ -0.87
DDX41-216ENST00000513562 ZAR1Q86SH2 424 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 LRRC8AQ8IWT6 810 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 B4GALNT2Q8NHY0 566 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 GPR151Q8TDV0 419 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 FBF1Q8TES7 1133 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 ZNF75CPQ92670 426 aaPredicted RBP9.61□□□□□ -0.87
DDX41-216ENST00000513562 APIPQ96GX9 242 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 AMDHD1Q96NU7 426 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 FOXN4Q96NZ1 517 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 SORCS2Q96PQ0 1159 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 EBPLQ9BY08 206 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 ACPTQ9BZG2 426 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 BHLHE41Q9C0J9 482 aaPredicted RBP9.61□□□□□ -0.87
DDX41-216ENST00000513562 BPESC1Q9GZL8 116 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 GLIPR2Q9H4G4 154 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 MYOZ1Q9NP98 299 aaPredicted RBP9.61□□□□□ -0.87
DDX41-216ENST00000513562 MYNNQ9NPC7 610 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 TAS2R7Q9NYW3 318 aa9.61□□□□□ -0.87
DDX41-216ENST00000513562 TMEFF2Q9UIK5 374 aaPredicted RBP9.61□□□□□ -0.87
DDX41-216ENST00000513562 A0A1W2PQD3 144 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 M0R1B8 84 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 ZNF195O14628 629 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 CYTIPO60759 359 aa9.6□□□□□ -0.87
DDX41-216ENST00000513562 SMIM24O75264 130 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms