RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 KLHL9Q9P2J3 617 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 RNF14Q9UBS8 474 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 JRKLQ9Y4A0 524 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 TRAF6Q9Y4K3 522 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 SLC25A15Q9Y619 301 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 A0A087WV62 115 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 NPIPA5A0A0B4J1W7 369 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 GNG14A0A1W2PPG7 69 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 SERINC4A6NH21 518 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 FAM159BA6NKW6 160 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 CCT8L1PA6NM43 557 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 ALG1L2C9J202 215 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 NPIPA7E9PJI5 369 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 TP73O15350 636 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 PCDH7O60245 1069 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 KCNH1O95259 989 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 OXSR1O95747 527 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 IGHV3-9P01782 118 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 JUNP05412 331 aaKnown RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 NPIPA8P0DM63 369 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 APEX1P27695 318 aaKnown RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 ELK4P28324 431 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 APOBEC3AP31941 199 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 GABRA3P34903 492 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 NCBP2P52298 156 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 LGALS3BPQ08380 585 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 MLC1Q15049 377 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 FAM83EQ2M2I3 478 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 GGTA1PQ4G0N0 100 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 METTL2BQ6P1Q9 378 aaKnown RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 ZNF100Q8IYN0 542 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 SLC43A2Q8N370 569 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 LINC01356Q8N9X3 169 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 ZNF540Q8NDQ6 660 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 ATP6V1C2Q8NEY4 427 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 OR4F6Q8NGB9 312 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 OR4C3Q8NH37 302 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 PYROXD1Q8WU10 500 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 PIK3R3Q92569 461 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 PHF21BQ96EK2 531 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 ZNF300Q96RE9 604 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 OSBPL9Q96SU4 736 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 VRK1Q99986 396 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 PSD2Q9BQI7 771 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 C1QTNF6Q9BXI9 259 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 COQ10BQ9H8M1 238 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 FKRPQ9H9S5 495 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 BRF2Q9HAW0 419 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 MYOZ1Q9NP98 299 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 EQTNQ9NQ60 294 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 NMRK1Q9NWW6 199 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 MCM8Q9UJA3 840 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 ING1Q9UK53 422 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 PCTPQ9UKL6 214 aa9.21□□□□□ -0.94
CLDND1-227ENST00000513452 C19orf53Q9UNZ5 99 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-227ENST00000513452 CIB4A0PJX0 185 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 GJE1A6NN92 205 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 ATP6V1G2-DDX39BF2Z307 99 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 UPK1AO00322 258 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 RGS14O43566 566 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 PSMG1O95456 288 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 LINGO3P0C6S8 592 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 PRIM2P49643 509 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 CHN2P52757 468 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 SNRPD2P62316 118 aaKnown RBP9.2□□□□□ -0.94
CLDND1-227ENST00000513452 PHC1P78364 1004 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 DR1Q01658 176 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 TMEM176BQ3YBM2 270 aaPredicted RBP9.2□□□□□ -0.94
CLDND1-227ENST00000513452 ARL13AQ5H913 290 aaPredicted RBP9.2□□□□□ -0.94
CLDND1-227ENST00000513452 GRTP1Q5TC63 336 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 LETMD1Q6P1Q0 360 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 RPS27LQ71UM5 84 aaKnown RBP9.2□□□□□ -0.94
CLDND1-227ENST00000513452 SLC46A3Q7Z3Q1 461 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 KLHL7Q8IXQ5 586 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 UBE2J2Q8N2K1 259 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 OR2L13Q8N349 312 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 ZNF418Q8TF45 676 aaPredicted RBP9.2□□□□□ -0.94
CLDND1-227ENST00000513452 ZFP90Q8TF47 636 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 SNX18Q96RF0 628 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 LMF2Q9BU23 707 aaKnown RBP9.2□□□□□ -0.94
CLDND1-227ENST00000513452 ANKZF1Q9H8Y5 726 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 C3orf14Q9HBI5 128 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 HHATLQ9HCP6 504 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 NTMQ9P121 344 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 VPS29Q9UBQ0 182 aa9.2□□□□□ -0.94
CLDND1-227ENST00000513452 DMGDHQ9UI17 866 aaKnown RBP9.2□□□□□ -0.94
CLDND1-227ENST00000513452 A0A1W2PNR3 127 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 CCDC189A1A4V9 331 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 ZNF195O14628 629 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 TMPRSS2O15393 492 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 EFNA2O43921 213 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 CDC25BP30305 580 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 SLC7A1P30825 629 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 EIF1P41567 113 aaKnown RBP9.19□□□□□ -0.94
CLDND1-227ENST00000513452 CDH15P55291 814 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 RAE1P78406 368 aaKnown RBP9.19□□□□□ -0.94
CLDND1-227ENST00000513452 RASGEF1BQ0VAM2 473 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 SLC29A2Q14542 456 aa9.19□□□□□ -0.94
CLDND1-227ENST00000513452 HEPACAMQ14CZ8 416 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms