RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 XKR7Q5GH72 579 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 GTF2IRD2BQ6EKJ0 949 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 CDC73Q6P1J9 531 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 Q71RC1 249 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 MTERF4Q7Z6M4 381 aaKnown RBP13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 YTHDF3Q7Z739 585 aaKnown RBP13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 GTF2IRD2Q86UP8 949 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 RIBC1Q8N443 379 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 BANPQ8N9N5 519 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 ZNF527Q8NB42 609 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 OR7A2PQ8NGA2 310 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 PSMA8Q8TAA3 256 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 POC1BQ8TC44 478 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 CDS1Q92903 461 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 KLHL15Q96M94 604 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 MECRQ9BV79 373 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 OR10A4Q9H209 315 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 ATAD3AQ9NVI7 634 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 SNX8Q9Y5X2 465 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 DSCAMO60469 2012 aa13.15□□□□□ -0.3
CCHCR1-229ENST00000512418 PEX11AO75192 247 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 LYPLA1O75608 230 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 SOX30O94993 753 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 KRT16P08779 473 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 PABPC4LP0CB38 370 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 PSMB1P20618 241 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 AGTR1P30556 359 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 SERPINB5P36952 375 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 SUMO3P55854 103 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 ZNF117Q03924 483 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 FOXF1Q12946 379 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 PTGR1Q14914 329 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 ZNF239Q16600 458 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 ATP6AP1LQ52LC2 224 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 LILRA2Q8N149 483 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 NATD1Q8N6N6 113 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 OR56A1Q8NGH5 318 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 PPP1R14CQ8TAE6 165 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 PHOSPHO1Q8TCT1 267 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 AGR3Q8TD06 166 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 RNF128Q8TEB7 428 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 OR5P2Q8WZ92 322 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 OSTF1Q92882 214 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 CPNE4Q96A23 557 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 PERPQ96FX8 193 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 Q96MF0 132 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 KLHDC3Q9BQ90 382 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 BDH2Q9BUT1 245 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 ACTRT3Q9BYD9 372 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 GSX2Q9BZM3 304 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 ACTR6Q9GZN1 396 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 HOXD1Q9GZZ0 328 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 TIGARQ9NQ88 270 aa13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 FAF1Q9UNN5 650 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-229ENST00000512418 GJE1A6NN92 205 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 H3BNH8 94 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 H7C1Q1 480 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 KLF4O43474 513 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 NUDT14O95848 222 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 LAMP1P11279 417 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 ADH6P28332 368 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 SFTPDP35247 375 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 CCT3P49368 545 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 CARD18P57730 90 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 TP53BP2Q13625 1128 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 RNPS1Q15287 305 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 KLHL26Q53HC5 615 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 DCST2Q5T1A1 773 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 ZNF704Q6ZNC4 412 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 PLEKHM3Q6ZWE6 761 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 OR2W6PQ8NHA6 318 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 ADAMTS15Q8TE58 950 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 ARSGQ96EG1 525 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 REXO5Q96IC2 774 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 PRPF18Q99633 342 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 C12orf49Q9H741 205 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 CXorf36Q9H7Y0 433 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 GPATCH2Q9NW75 528 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 SLC17A7Q9P2U7 560 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 GIMAP2Q9UG22 337 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 GPR52Q9Y2T5 361 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 ACTL7BQ9Y614 415 aa13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 GPC6Q9Y625 555 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-229ENST00000512418 HEATR5AQ86XA9 2040 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 SLU7O95391 586 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 NUDT17P0C025 328 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 NID1P14543 1247 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 SHC1P29353 583 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 PTH2RP49190 550 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 P2RX1P51575 399 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 LSM12Q3MHD2 195 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 SPDYE7PQ495Y7 208 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 TMEM201Q5SNT2 666 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 C6orf136Q5SQH8 315 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 CBLN3Q6UW01 205 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 ZCCHC23Q6ZST2 131 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 CIARTQ8N365 385 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 FNDC5Q8NAU1 212 aa13.12□□□□□ -0.31
CCHCR1-229ENST00000512418 SFXN5Q8TD22 340 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms