RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 NPAP1Q9NZP6 1156 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 FLRT3Q9NZU0 649 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 FKBP7Q9Y680 259 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 IGHV4-61A0A0C4DH41 118 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 EXOC1LA0A1B0GW35 172 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 TMEM89A2RUT3 159 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 SMIM23A6NLE4 172 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 SMAD9O15198 467 aaKnown RBP10.2□□□□□ -0.78
RNF4-216ENST00000511859 GMFGO60234 142 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 COQ9O75208 318 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 ERLIN1O75477 346 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 VENTXO95231 258 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 CD40P25942 277 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 CRABP2P29373 138 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 APOBEC3AP31941 199 aaPredicted RBP10.2□□□□□ -0.78
RNF4-216ENST00000511859 SPRP35270 261 aaPredicted RBP10.2□□□□□ -0.78
RNF4-216ENST00000511859 GP5P40197 560 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 ARL1P40616 181 aaPredicted RBP10.2□□□□□ -0.78
RNF4-216ENST00000511859 OR3A2P47893 321 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 CCNG1P51959 295 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 ACTG1P63261 375 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 GALNT1Q10472 559 aaPredicted RBP10.2□□□□□ -0.78
RNF4-216ENST00000511859 ACAP2Q15057 778 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 ARL13AQ5H913 290 aaPredicted RBP10.2□□□□□ -0.78
RNF4-216ENST00000511859 FCRLAQ7L513 359 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 LILRA2Q8N149 483 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 CDYL2Q8N8U2 506 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 FAM110BQ8TC76 370 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 KCTD4Q8WVF5 259 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 NXNL1Q96CM4 212 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 KLHL15Q96M94 604 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 FOXN4Q96NZ1 517 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 CDK15Q96Q40 435 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 PAFAH2Q99487 392 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 NOL11Q9H8H0 719 aaKnown RBP10.2□□□□□ -0.78
RNF4-216ENST00000511859 Q9N2J8 555 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 GIMAP4Q9NUV9 329 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 SENP1Q9P0U3 644 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 SLC12A4Q9UP95 1085 aa10.2□□□□□ -0.78
RNF4-216ENST00000511859 A0A087WV62 115 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 OR5H1A6NKK0 313 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 LY6HO94772 140 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 UTS2O95399 124 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 ESRRBO95718 433 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 ABHD2P08910 425 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 COL6A2P12110 1019 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 ZNF41P51814 821 aaPredicted RBP10.19□□□□□ -0.78
RNF4-216ENST00000511859 MANFP55145 182 aaKnown RBP10.19□□□□□ -0.78
RNF4-216ENST00000511859 ZNF155Q12901 538 aaPredicted RBP10.19□□□□□ -0.78
RNF4-216ENST00000511859 PRR31Q5SQ13 230 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 GRTP1Q5TC63 336 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 APOOLQ6UXV4 268 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 DEF8Q6ZN54 512 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 CYS1Q717R9 158 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 OR7G2Q8NG99 324 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 RNF145Q96MT1 663 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 TMEM185BQ9H7F4 350 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 BRF2Q9HAW0 419 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 BCO1Q9HAY6 547 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 C3orf14Q9HBI5 128 aa10.19□□□□□ -0.78
RNF4-216ENST00000511859 PRKDCP78527 4128 aaKnown RBP10.19□□□□□ -0.78
RNF4-216ENST00000511859 A0A1W2PRB8 838 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 CCDC151A5D8V7 595 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 GJE1A6NN92 205 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 ALG1L2C9J202 215 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 FAM157AC9JC47 383 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 OR7A17O14581 309 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 SLITRK5O94991 958 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 INHBAP08476 426 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 CREB1P16220 341 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 PCMT1P22061 227 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 GCAP28676 217 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 EIF1P41567 113 aaKnown RBP10.18□□□□□ -0.78
RNF4-216ENST00000511859 SCGB2A2Q13296 93 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 ZNHIT3Q15649 155 aaPredicted RBP10.18□□□□□ -0.78
RNF4-216ENST00000511859 FAM83EQ2M2I3 478 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 PLPPR5Q32ZL2 321 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 MROH9Q5TGP6 573 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 UGT2A3Q6UWM9 527 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 CCDC91Q7Z6B0 441 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 FAM9CQ8IZT9 166 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 SEMA6DQ8NFY4 1073 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 EPS8L3Q8TE67 593 aaKnown RBP10.18□□□□□ -0.78
RNF4-216ENST00000511859 FAM216AQ8WUB2 273 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 DCAKDQ8WVC6 231 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 SLC9A6Q92581 669 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 HPS1Q92902 700 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 NPAS1Q99742 590 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 TRMOQ9BU70 441 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 FUT8Q9BYC5 575 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 SHCBP1LQ9BZQ2 653 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 ELOVL6Q9H5J4 265 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 ZNF696Q9H7X3 374 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 MYNNQ9NPC7 610 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 SLC35C2Q9NQQ7 365 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 MED17Q9NVC6 651 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 KLHL9Q9P2J3 617 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 TBK1Q9UHD2 729 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 CMYA5Q8N3K9 4069 aa10.18□□□□□ -0.78
RNF4-216ENST00000511859 TLDC2A0PJX2 215 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms