RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 BMP8AQ7Z5Y6 402 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 UBE2Q1Q7Z7E8 422 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 SIRT6Q8N6T7 355 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 SLC7A6Q92536 515 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 ALG8Q9BVK2 526 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 TMEM168Q9H0V1 697 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 CMC2Q9NRP2 79 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 IL20RAQ9UHF4 553 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 BAIAP2Q9UQB8 552 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 CHD7Q9P2D1 2997 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 SCN2AQ99250 2005 aa13.22□□□□□ -0.29
AP003555.1-202ENST00000511013 DAPL1A0PJW8 107 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 FAM221BA6H8Z2 402 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 CD8B2A6NJW9 211 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 FAM183AA6NL82 134 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 C2orf74A8MZ97 194 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 H0YGG7 62 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 CD8BP10966 210 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 PRG2P13727 222 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 COL9A1P20849 921 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 HNRNPA2B1P22626 353 aaKnown RBP13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 HTR2AP28223 471 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 KIR2DL3P43628 341 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 INPP1P49441 399 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 CTBP2P56545 445 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 TAS2R43P59537 309 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 ARF3P61204 181 aaPredicted RBP13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 MRPS15P82914 257 aaKnown RBP13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 FAM109BQ6ICB4 259 aaPredicted RBP13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 SMARCD3Q6STE5 483 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 TMEM91Q6ZNR0 172 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 GATAD2AQ86YP4 633 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 GPALPP1Q8IXQ4 340 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 SLC43A2Q8N370 569 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 OR10G6Q8NH81 332 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 NACC2Q96BF6 587 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 KCTD12Q96CX2 325 aaKnown RBP13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 BMFQ96LC9 184 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 IL21RQ9HBE5 538 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 TRIM36Q9NQ86 728 aa13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 RBFOX1Q9NWB1 397 aaKnown RBP13.21□□□□□ -0.29
AP003555.1-202ENST00000511013 LOC105369274A0A096LPK9 316 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 LOC102723532A0A0G2JNH3 316 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 RIIAD1A6NNX1 92 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 NARSO43776 548 aaKnown RBP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 TRIM3O75382 744 aaPredicted RBP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 MT-ND5P03915 603 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 GKN3PP0CG01 181 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SRP54P61011 504 aaKnown RBP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 YPEL5P62699 121 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SNRPNP63162 240 aaKnown RBP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 ID2Q02363 134 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 GPR18Q14330 331 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SF3A2Q15428 464 aaKnown RBP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 TCEA2Q15560 299 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 VASNQ6EMK4 673 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 OR4N4Q8N0Y3 316 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 DUSP18Q8NEJ0 188 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 CCL4L1Q8NHW4 92 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SLC2A12Q8TD20 617 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 BPIFA2Q96DR5 249 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 TMEM43Q9BTV4 400 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 RPP25Q9BUL9 199 aaKnown RBP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 IFT27Q9BW83 186 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 RNF32Q9H0A6 362 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 CLDND1Q9NY35 253 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SLC35A3Q9Y2D2 325 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 FANCMQ8IYD8 2048 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 CENPVL1A0A0U1RR11 272 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 C2orf92A0A1B0GVN3 265 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SGK494L7N484 410 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 CYR61O00622 381 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 FGF17O60258 216 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 BRINP1O60477 761 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 DNAJB6O75190 326 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 TBXA2RP21731 343 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 DRD5P21918 477 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SSTR4P31391 388 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 GABRA3P34903 492 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 MAP3K8P41279 467 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 FOXK2Q01167 660 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 ILF3Q12906 894 aaKnown RBP eCLIP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 ADAM15Q13444 863 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 PRICKLE4Q2TBC4 344 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 WDR88Q6ZMY6 472 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 TPRA1Q86W33 373 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 TMEM99Q8N816 258 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 Q8N9G6 341 aaPredicted RBP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 SLC37A3Q8NCC5 494 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 OR5W2Q8NH69 310 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 OR4C6Q8NH72 309 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 PFN4Q8NHR9 129 aa13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 BAHD1Q8TBE0 780 aaPredicted RBP13.2□□□□□ -0.3
AP003555.1-202ENST00000511013 AHCYL2Q96HN2 611 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms