RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 MGAT4DA6NG13 374 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 NPIPA2E9PIF3 369 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 NPIPA3F8WFD2 350 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 TSPAN4O14817 238 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 CD5LO43866 347 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 NME2P1O60361 137 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 SRSF10O75494 262 aaKnown RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 NKX2-2O95096 273 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 NGFP01138 241 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 PIRTP0C851 137 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 TPBGLP0DKB5 382 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 CMA1P23946 247 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 PON1P27169 355 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 NDUFA8P51970 172 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 AIF1P55008 147 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 OC90Q02509 493 aaPredicted RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 PRKG2Q13237 762 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 MEP1AQ16819 746 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 ZNF658Q5TYW1 1059 aaPredicted RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 KIAA0930Q6ICG6 404 aaPredicted RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 ZNF613Q6PF04 617 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 TMEM205Q6UW68 189 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 HOOK3Q86VS8 718 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 SLC13A5Q86YT5 568 aaPredicted RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 CFAP206Q8IYR0 622 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 BBS5Q8N3I7 341 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 AMER3Q8N944 861 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 RELL2Q8NC24 303 aaPredicted RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 OR1J2Q8NGS2 313 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 OR2L2Q8NH16 312 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 GDAP1Q8TB36 358 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 RBM41Q96IZ5 413 aaKnown RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 TRIM7Q9C029 511 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 CLSTN2Q9H4D0 955 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 DHX35Q9H5Z1 703 aaKnown RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 ETNK2Q9NVF9 386 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 CWC15Q9P013 229 aaKnown RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 EXOGQ9Y2C4 368 aaKnown RBP5.41□□□□□ -1.54
USP53-206ENST00000510737 TENM1Q9UKZ4 2725 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 A0A0J9YY10 115 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 TTC36A6NLP5 189 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 GABRR3A8MPY1 467 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 A8MV72 311 aaPredicted RBP5.4□□□□□ -1.54
USP53-206ENST00000510737 TFECO14948 347 aaPredicted RBP5.4□□□□□ -1.54
USP53-206ENST00000510737 SLC25A12O75746 678 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 LSM8O95777 96 aaKnown RBP5.4□□□□□ -1.54
USP53-206ENST00000510737 SLC35G4P0C7Q5 338 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 PRKCIP41743 596 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 SYKP43405 635 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 HCAR3P49019 387 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 RPL7AP62424 266 aaKnown RBP5.4□□□□□ -1.54
USP53-206ENST00000510737 OGDHQ02218 1023 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 DPYSQ14117 519 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 ACKR1Q16570 336 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 FBXL19-AS1Q494R0 122 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 XKR6Q5GH73 641 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 FAM182AQ5T1J6 154 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 ERMARDQ5T6L9 678 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 DET1Q7L5Y6 550 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 PM20D2Q8IYS1 436 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 RASGEF1CQ8N431 466 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 HARBI1Q96MB7 349 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 ZNF285Q96NJ3 590 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 PEBP4Q96S96 227 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 C11orf70Q9BRQ4 267 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 CNPY3Q9BT09 278 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 POLR1EQ9GZS1 481 aaKnown RBP5.4□□□□□ -1.54
USP53-206ENST00000510737 ATG10Q9H0Y0 220 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 PIGMQ9H3S5 423 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 KCNK13Q9HB14 408 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 IL26Q9NPH9 171 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 PCDHB16Q9NRJ7 776 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 PLCXD1Q9NUJ7 323 aa5.4□□□□□ -1.54
USP53-206ENST00000510737 TRRAPQ9Y4A5 3859 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 TEX13DA0A0J9YY54 714 aaPredicted RBP5.39□□□□□ -1.55
USP53-206ENST00000510737 HYKKA2RU49 373 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 SIGLEC16A6NMB1 481 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 BUD23O43709 281 aaKnown RBP5.39□□□□□ -1.55
USP53-206ENST00000510737 PRPSAP2O60256 369 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 GOSR1O95249 250 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 SLC4A1P02730 911 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 HEXBP07686 556 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 MAGP20916 626 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 PEBP1P30086 187 aaKnown RBP5.39□□□□□ -1.55
USP53-206ENST00000510737 WNT5AP41221 380 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 MMP15P51511 669 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 CDH6P55285 790 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 VSX2P58304 361 aaPredicted RBP5.39□□□□□ -1.55
USP53-206ENST00000510737 PNOCQ13519 176 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 BAK1Q16611 211 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 TAZQ16635 292 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 TCTEX1D4Q5JR98 221 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 FAM69AQ5T7M9 428 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 RIPPLY2Q5TAB7 128 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 SARM1Q6SZW1 724 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 CYP4V2Q6ZWL3 525 aaPredicted RBP5.39□□□□□ -1.55
USP53-206ENST00000510737 ZFP62Q8NB50 900 aaPredicted RBP5.39□□□□□ -1.55
USP53-206ENST00000510737 POGLUT1Q8NBL1 392 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 MSANTD4Q8NCY6 345 aa5.39□□□□□ -1.55
USP53-206ENST00000510737 CCM2Q9BSQ5 444 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms