RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CLDN24A6NM45 220 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 SCDO00767 359 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 HCRTR2O43614 444 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 EFNA2O43921 213 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 LINGO3P0C6S8 592 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 ZCCHC18P0CG32 403 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 PRF1P14222 555 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 ATP6V1C1P21283 382 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 SHC1P29353 583 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 CHRNB4P30926 498 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 CHI3L1P36222 383 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-220ENST00000508902 ATP4BP51164 291 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 CHRNEQ04844 493 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 GPR68Q15743 365 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 SP5Q6BEB4 398 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-220ENST00000508902 MSANTD1Q6ZTZ1 278 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 GGNQ86UU5 652 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 EID3Q8N140 333 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 MBD3L2Q8NHZ7 208 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-220ENST00000508902 PHOSPHO1Q8TCT1 267 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 TRIB1Q96RU8 372 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 SLC38A1Q9H2H9 487 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 FGFR1OP2Q9NVK5 253 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 CCDC167Q9P0B6 97 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 L3MBTL1Q9Y468 752 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 POLQO75417 2590 aa16.4■□□□□ 0.22
CLDND1-220ENST00000508902 HRNRQ86YZ3 2850 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-220ENST00000508902 CSMD2Q7Z408 3487 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 CD8B2A6NJW9 211 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 CLCA1A8K7I4 914 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 ADAM11O75078 769 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 TGM6O95932 706 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 AK1P00568 194 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 ETFAP13804 333 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 IGFBP2P18065 325 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 PTGER4P35408 488 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 CLK3P49761 638 aaKnown RBP16.39■□□□□ 0.21
CLDND1-220ENST00000508902 SF3A3Q12874 501 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLDND1-220ENST00000508902 SKP2Q13309 424 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 LACC1Q8IV20 430 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 PM20D2Q8IYS1 436 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 FAM71CQ8NEG0 241 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 B4GALNT2Q8NHY0 566 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 ZPLD1Q8TCW7 415 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 ADGRG7Q96K78 797 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 RSPO3Q9BXY4 272 aaPredicted RBP16.39■□□□□ 0.21
CLDND1-220ENST00000508902 ACBD3Q9H3P7 528 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 IKZF5Q9H5V7 419 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 PCDHB14Q9Y5E9 798 aa16.39■□□□□ 0.21
CLDND1-220ENST00000508902 C7orf72A4D263 438 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 SERINC4A6NH21 518 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 DUXAA6NLW8 204 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 H0Y3Z8 333 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 NR5A2O00482 541 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 STX11O75558 287 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 H6PDO95479 791 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 GUSBP08236 651 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 HOXD4P09016 255 aaPredicted RBP16.38■□□□□ 0.21
CLDND1-220ENST00000508902 NUDT7P0C024 238 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 FOXF1Q12946 379 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 FOXF2Q12947 444 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 SQLEQ14534 574 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 CTU2Q2VPK5 515 aaKnown RBP16.38■□□□□ 0.21
CLDND1-220ENST00000508902 GLYR1Q49A26 553 aaPredicted RBP16.38■□□□□ 0.21
CLDND1-220ENST00000508902 C16orf62Q7Z3J2 963 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 MISPQ8IVT2 679 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 UBQLNLQ8IYU4 475 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 GTPBP8Q8N3Z3 284 aaPredicted RBP16.38■□□□□ 0.21
CLDND1-220ENST00000508902 ZNF614Q8N883 585 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 OR10Q1Q8NGQ4 319 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 GPR119Q8TDV5 335 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 SPDL1Q96EA4 605 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 ZNF845Q96IR2 970 aaPredicted RBP16.38■□□□□ 0.21
CLDND1-220ENST00000508902 ITCHQ96J02 903 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 RNF145Q96MT1 663 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 UCN2Q96RP3 112 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 TREX2Q9BQ50 279 aaPredicted RBP16.38■□□□□ 0.21
CLDND1-220ENST00000508902 CCDC134Q9H6E4 229 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 PTGES2Q9H7Z7 377 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 TPT1P8Q9HAU6 139 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 WDR45Q9Y484 360 aa16.38■□□□□ 0.21
CLDND1-220ENST00000508902 PDZD2O15018 2839 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 A0A0G2JND7 137 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 H3BML4 177 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 DNAJA2O60884 412 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 SOX30O94993 753 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 NTN1O95631 604 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 OPN1LWP04000 364 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 POU3F2P20265 443 aaPredicted RBP16.37■□□□□ 0.21
CLDND1-220ENST00000508902 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
CLDND1-220ENST00000508902 MSX1P28360 303 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 TIMP3P35625 211 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 PGM1P36871 562 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 STX1BP61266 288 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 LRRC74AQ0VAA2 488 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 FGFBP1Q14512 234 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 BCL2A1Q16548 175 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 AGKQ53H12 422 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 LRIF1Q5T3J3 769 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 AAGABQ6PD74 315 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms