RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 VCLP18206 1134 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ADORA1P30542 326 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ALDH3B2P48448 385 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 SERPINH1P50454 418 aaKnown RBP3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 UCNP55089 124 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 HAND2P61296 217 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 GNB2P62879 340 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ANGPT1Q15389 498 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 CCDC57Q2TAC2 916 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 IGFL3Q6UXB1 125 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 C14orf178Q8N769 122 aaPredicted RBP3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 VN1R2Q8NFZ6 395 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 FIBINQ8TAL6 211 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 C16orf74Q96GX8 76 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 RPGRIP1Q96KN7 1286 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 IMMP1LQ96LU5 166 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 CACNG6Q9BXT2 260 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ALDH8A1Q9H2A2 487 aaPredicted RBP3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ABCB8Q9NUT2 735 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 DPM3Q9P2X0 92 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 LIPT1Q9Y234 373 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ZNFX1Q9P2E3 1918 aaKnown RBP3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 MROH7-TTC4A0A0A0MT08 1334 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 UTP20O75691 2785 aaKnown RBP3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ASXL3Q9C0F0 2248 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 A0A0U1RQK1 487 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 MFSD2BA6NFX1 497 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 SERF1AO75920 110 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 IQCF3P0C7M6 154 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 DNAJB1P25685 340 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 MAT2AP31153 395 aaKnown RBP3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 ZNF131P52739 623 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 HERV-K104P63124 156 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 MECOMQ03112 1051 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 EXOSC7Q15024 291 aaKnown RBP3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 CAVIN4Q5BKX8 364 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 BEND3Q5T5X7 828 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 ASRGL1Q7L266 308 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 FNDC8Q8TC99 324 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 TSPYL1Q9H0U9 437 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 DCLRE1BQ9H816 532 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 ACOXLQ9NUZ1 547 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 BARX2Q9UMQ3 279 aaPredicted RBP3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 FOXA2Q9Y261 457 aaPredicted RBP3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 COL11A1P12107 1806 aaPredicted RBP3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 PARP14Q460N5 1801 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 ATMQ13315 3056 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 FBN2P35556 2912 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 RALGAPA2Q2PPJ7 1873 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 MYO10Q9HD67 2058 aa3.39□□□□□ -1.87
TOPBP1-206ENST00000508524 LRRK1Q38SD2 2015 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 PSMA7O14818 248 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 IGLV1-47P01700 117 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 MDKP21741 143 aaPredicted RBP3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 ZP3P21754 424 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 FCARP24071 287 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 TRPC1P48995 793 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 NT5C2P49902 561 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 YWHAHQ04917 246 aaPredicted RBP3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 GPM6BQ13491 265 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 PAGE2BQ5JRK9 111 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 CELF3Q5SZQ8 465 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 SCARA5Q6ZMJ2 495 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 PIWIL3Q7Z3Z3 882 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 RFESDQ8TAC1 157 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 NMUR2Q9GZQ4 415 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 ELOVL4Q9GZR5 314 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 TSPY26PQ9H489 355 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 SLC2A6Q9UGQ3 507 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 SLC9A8Q9Y2E8 581 aa3.38□□□□□ -1.87
TOPBP1-206ENST00000508524 FANCMQ8IYD8 2048 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 APC2O95996 2303 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 MGAQ8IWI9 3026 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 NF1P21359 2839 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 LRBAP50851 2863 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 NPIPA5A0A0B4J1W7 369 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 NPIPA5E9PKD4 350 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 LCMT2O60294 686 aaKnown RBP3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 RANBP6O60518 1105 aaKnown RBP3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 GMNNO75496 209 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 TCF7P36402 384 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 PSG7Q13046 419 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 ZIC1Q15915 447 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 RABL6Q3YEC7 729 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 GLYR1Q49A26 553 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 OTPQ5XKR4 325 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 ATRAIDQ6UW56 229 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 KCTD9Q7L273 389 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 SLC22A16Q86VW1 577 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 TGIF2LYQ8IUE0 185 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 FAM133AQ8N9E0 248 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 NAT8LQ8N9F0 302 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 RNF138Q8WVD3 245 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 ELSPBP1Q96BH3 223 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 ADPGKQ9BRR6 497 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 DPH7Q9BTV6 452 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 HCAR1Q9BXC0 346 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 OPN3Q9H1Y3 402 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 COPS7BQ9H9Q2 264 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 SCN10AQ9Y5Y9 1956 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms