RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 PIGQQ9BRB3 760 aa18.01■□□□□ 0.47
SNX25-204ENST00000506896 UGT2B28Q9BY64 529 aa18.01■□□□□ 0.47
SNX25-204ENST00000506896 PRDM14Q9GZV8 571 aa18.01■□□□□ 0.47
SNX25-204ENST00000506896 MTHFD2LQ9H903 347 aaPredicted RBP18.01■□□□□ 0.47
SNX25-204ENST00000506896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.01■□□□□ 0.47
SNX25-204ENST00000506896 AHRRA9YTQ3 701 aa18■□□□□ 0.47
SNX25-204ENST00000506896 ZNF264O43296 627 aa18■□□□□ 0.47
SNX25-204ENST00000506896 EIF4E2O60573 245 aaKnown RBP18■□□□□ 0.47
SNX25-204ENST00000506896 TNFRSF21O75509 655 aa18■□□□□ 0.47
SNX25-204ENST00000506896 CHRM4P08173 479 aa18■□□□□ 0.47
SNX25-204ENST00000506896 TFPTP0C1Z6 253 aa18■□□□□ 0.47
SNX25-204ENST00000506896 UBL4AP11441 157 aa18■□□□□ 0.47
SNX25-204ENST00000506896 P2RX1P51575 399 aa18■□□□□ 0.47
SNX25-204ENST00000506896 ZNF41P51814 821 aaPredicted RBP18■□□□□ 0.47
SNX25-204ENST00000506896 CRISP3P54108 245 aa18■□□□□ 0.47
SNX25-204ENST00000506896 ZNF117Q03924 483 aa18■□□□□ 0.47
SNX25-204ENST00000506896 CHRNEQ04844 493 aa18■□□□□ 0.47
SNX25-204ENST00000506896 ART3Q13508 389 aa18■□□□□ 0.47
SNX25-204ENST00000506896 RAET1LQ5VY80 246 aa18■□□□□ 0.47
SNX25-204ENST00000506896 ZNF585AQ6P3V2 769 aa18■□□□□ 0.47
SNX25-204ENST00000506896 EIF3MQ7L2H7 374 aaKnown RBP18■□□□□ 0.47
SNX25-204ENST00000506896 RETREG3Q86VR2 466 aa18■□□□□ 0.47
SNX25-204ENST00000506896 TOR1AIP2Q8NFQ8 470 aa18■□□□□ 0.47
SNX25-204ENST00000506896 ZBTB8AQ96BR9 441 aa18■□□□□ 0.47
SNX25-204ENST00000506896 SH3YL1Q96HL8 342 aaPredicted RBP18■□□□□ 0.47
SNX25-204ENST00000506896 DMRTA2Q96SC8 542 aa18■□□□□ 0.47
SNX25-204ENST00000506896 SLC38A1Q9H2H9 487 aa18■□□□□ 0.47
SNX25-204ENST00000506896 A4GALTQ9NPC4 353 aa18■□□□□ 0.47
SNX25-204ENST00000506896 KCNE5Q9UJ90 142 aa18■□□□□ 0.47
SNX25-204ENST00000506896 SLC35A3Q9Y2D2 325 aa18■□□□□ 0.47
SNX25-204ENST00000506896 RPH3AQ9Y2J0 694 aaPredicted RBP18■□□□□ 0.47
SNX25-204ENST00000506896 CAPN7Q9Y6W3 813 aa18■□□□□ 0.47
SNX25-204ENST00000506896 C7orf72A4D263 438 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 CSTAP01040 98 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 CPN1P15169 458 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 ZNF17P17021 662 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 DRD4P21917 467 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 SMSP52788 366 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 B3GALT5-AS1P59052 145 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 NFYCQ13952 458 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 BCL2A1Q16548 175 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 PRAMEF8Q5VWM4 474 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 PRAMEF7Q5VXH5 474 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 XKRXQ6PP77 449 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 C3P1Q6ZMU1 363 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 CMIPQ8IY22 773 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 METTL25Q8N6Q8 603 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 SLC38A5Q8WUX1 472 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 FAM107BQ9H098 131 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.99■□□□□ 0.47
SNX25-204ENST00000506896 STOML1Q9UBI4 398 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 ICAM5Q9UMF0 924 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 CARD8Q9Y2G2 431 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 L3MBTL1Q9Y468 752 aa17.99■□□□□ 0.47
SNX25-204ENST00000506896 PHF3Q92576 2039 aaKnown RBP17.99■□□□□ 0.47
SNX25-204ENST00000506896 CACNA1CQ13936 2221 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 AGAP5A6NIR3 686 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 GMFGO60234 142 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 SNX3O60493 162 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 NPPAP01160 153 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 BCHEP06276 602 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 GPX2P18283 190 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 AGAP20933 346 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 EIF1P41567 113 aaKnown RBP17.98■□□□□ 0.47
SNX25-204ENST00000506896 FGFBP1Q14512 234 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 TMEM44Q2T9K0 475 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 MMEL1Q495T6 779 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 RUNDC3AQ59EK9 446 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 ZNF787Q6DD87 383 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 ARSKQ6UWY0 536 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 B3GNT6Q6ZMB0 384 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 OLIG3Q7RTU3 272 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 PEX5LQ8IYB4 626 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 ULK2Q8IYT8 1036 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 WDYHV1Q96HA8 205 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 ANKRD27Q96NW4 1050 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 CGREF1Q99674 301 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 TREX2Q9BQ50 279 aaPredicted RBP17.98■□□□□ 0.47
SNX25-204ENST00000506896 CPPED1Q9BRF8 314 aaPredicted RBP17.98■□□□□ 0.47
SNX25-204ENST00000506896 LAT2Q9GZY6 243 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 RUBCNLQ9H714 662 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 MED17Q9NVC6 651 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 ALKBH4Q9NXW9 302 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 VDAC3Q9Y277 283 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 NOTCH2Q04721 2471 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 DSPPQ9NZW4 1301 aa17.98■□□□□ 0.47
SNX25-204ENST00000506896 A0A0G2JPF8 293 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 HNRNPCL2B2RXH8 293 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 HNRNPCL3B7ZW38 293 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 HNRNPCL1O60812 293 aaKnown RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 NUDT14O95848 222 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 DBIP07108 87 aaKnown RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 HNRNPCL4P0DMR1 293 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 RPS4Y1P22090 263 aaKnown RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 TCEA1P23193 301 aaKnown RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 KCNJ10P78508 379 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 SKP2Q13309 424 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 CBFBQ13951 182 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 CYLC2Q14093 348 aaPredicted RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 MAPK11Q15759 364 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms