RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 LEF1Q9UJU2 399 aaPredicted RBP6.6□□□□□ -1.35
GYPB-206ENST00000506516 FBXL2Q9UKC9 423 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 MKLN1Q9UL63 735 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 SLC6A5Q9Y345 797 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 NDUFAF1Q9Y375 327 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 WDR45Q9Y484 360 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 DTNAQ9Y4J8 743 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 PCDHB14Q9Y5E9 798 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 CROCCQ5TZA2 2017 aa6.6□□□□□ -1.35
GYPB-206ENST00000506516 HMGN4O00479 90 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ANGPT2O15123 496 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZNF264O43296 627 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 HCRTR2O43614 444 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZIC3O60481 467 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 EIF4E2O60573 245 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 FCMRO60667 390 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZG16O60844 167 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 NUDT14O95848 222 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 LDLRP01130 860 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 SNRPB2P08579 225 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 NR2F1P10589 423 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 CPN1P15169 458 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 HK1P19367 917 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 AGAP20933 346 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ACVR2AP27037 513 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ADSLP30566 484 aaPredicted RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZNF41P51814 821 aaPredicted RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 EEFSECP57772 596 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 DSTNP60981 165 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 CRYZQ08257 329 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 PMPCAQ10713 525 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 SF3A3Q12874 501 aaKnown RBP eCLIP6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZNF141Q15928 474 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 BCL2A1Q16548 175 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 SYPL1Q16563 259 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 MMEL1Q495T6 779 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 LRIF1Q5T3J3 769 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 AP1ARQ63HQ0 302 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 TYW3Q6IPR3 259 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 B3GNT6Q6ZMB0 384 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 LRRC74BQ6ZQY2 392 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 EIF3MQ7L2H7 374 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 CHMP1BQ7LBR1 199 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 CPLX4Q7Z7G2 160 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZAR1Q86SH2 424 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 MRGPRGQ86SM5 289 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZNF619Q8N2I2 560 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 SVOPQ8N4V2 548 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZNF808Q8N4W9 903 aaPredicted RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZNF614Q8N883 585 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 GATSQ8NAP1 163 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 OR10Q1Q8NGQ4 319 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 PNPT1Q8TCS8 783 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 PHF10Q8WUB8 498 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 RND1Q92730 232 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZBTB8AQ96BR9 441 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 C1GALT1C1Q96EU7 318 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 CCDC120Q96HB5 630 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 SFXN2Q96NB2 322 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZNF317Q96PQ6 595 aaPredicted RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 TRNT1Q96Q11 434 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 PIGQQ9BRB3 760 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 UGT2B28Q9BY64 529 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 RTN4RQ9BZR6 473 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 PAIP1Q9H074 479 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 NSRP1Q9H0G5 558 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 SERHL2Q9H4I8 314 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 ZNF385DQ9H6B1 395 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 CACYBPQ9HB71 228 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 SPRR3Q9UBC9 169 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 P2RX2Q9UBL9 471 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 TNFRSF10DQ9UBN6 386 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 CORO2BQ9UQ03 480 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 CAMK2AQ9UQM7 478 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 RPH3AQ9Y2J0 694 aaPredicted RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 TENM4Q6N022 2769 aa6.59□□□□□ -1.35
GYPB-206ENST00000506516 GCN1Q92616 2671 aaKnown RBP6.59□□□□□ -1.35
GYPB-206ENST00000506516 CNTRLQ7Z7A1 2325 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 NPIPA5A0A0B4J1W7 369 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 GMNCA6NCL1 334 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 SERINC4A6NH21 518 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 NPIPA7E9PJI5 369 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 NPIPB9F8W1W9 429 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 ADAM10O14672 748 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 GMFGO60234 142 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CCDC22O60826 627 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 UGT2B17O75795 530 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 H6PDO95479 791 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CSTAP01040 98 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 NPIPA8P0DM63 369 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 UBL4AP11441 157 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 PEPDP12955 493 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 ETFAP13804 333 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CAPN3P20807 821 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 EIF1P41567 113 aaKnown RBP6.58□□□□□ -1.36
GYPB-206ENST00000506516 P2RX1P51575 399 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CRISP3P54108 245 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 SUMO3P55854 103 aaPredicted RBP6.58□□□□□ -1.36
GYPB-206ENST00000506516 GFRA1P56159 465 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms