RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), human

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-205	ENST00000505583	SLITRK5	O94991	958 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	KCNK2	O95069	426 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	CD8A	P01732	235 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	IGHV4-39	P01824	125 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	THBS1	P07996	1170 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	LINGO3	P0C6S8	592 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	NPIPA8	P0DM63	369 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	PPP3CB	P16298	524 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	ZNF17	P17021	662 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	ATF4	P18848	351 aa	Predicted RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	TAC1	P20366	129 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	PSMB1	P20618	241 aa	Known RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	ENPP1	P22413	925 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	NTS	P30990	170 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	SFTPD	P35247	375 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	PRIM2	P49643	509 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	CLK3	P49761	638 aa	Known RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	PRKAG1	P54619	331 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	PKNOX1	P55347	436 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	RAC1	P63000	192 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	BSPH1	Q075Z2	132 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	FAP	Q12884	760 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	FOXF1	Q12946	379 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	SLC29A2	Q14542	456 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	ZNHIT3	Q15649	155 aa	Predicted RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	TOMM34	Q15785	309 aa	Predicted RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	PGGHG	Q32M88	737 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	NDUFAF6	Q330K2	333 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	GLE1	Q53GS7	698 aa	Known RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	EXOSC6	Q5RKV6	272 aa	Known RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	NCMAP	Q5T1S8	102 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	CPTP	Q5TA50	214 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	HBM	Q6B0K9	141 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	CLEC6A	Q6EIG7	209 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	HEPHL1	Q6MZM0	1159 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	ADAM5	Q6NVV9	412 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	CBLN3	Q6UW01	205 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	TFAP2E	Q6VUC0	442 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583		Q6ZSR9	355 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	BEND4	Q6ZU67	534 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	ESPNL	Q6ZVH7	1005 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	WDR75	Q8IWA0	830 aa	Known RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	TUSC5	Q8IXB3	177 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	PHC2	Q8IXK0	858 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	LILRA2	Q8N149	483 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	MMGT1	Q8N4V1	131 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	OR2T11	Q8NH01	316 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	CLHC1	Q8NHS4	586 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	RNF128	Q8TEB7	428 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	NANOS1	Q8WY41	292 aa	Known RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	OSTF1	Q92882	214 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	DTNBP1	Q96EV8	351 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	REG4	Q9BYZ8	158 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	SLCO5A1	Q9H2Y9	848 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	TUBB1	Q9H4B7	451 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	CXorf56	Q9H5V9	222 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	COQ10B	Q9H8M1	238 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	BAIAP2L1	Q9UHR4	511 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	LIPT1	Q9Y234	373 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	GPR52	Q9Y2T5	361 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	RNF115	Q9Y4L5	304 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	SON	P18583	2426 aa	Known RBP	5.2	□□□□□ -1.58
GYPB-205	ENST00000505583	COL6A5	A8TX70	2615 aa		5.2	□□□□□ -1.58
GYPB-205	ENST00000505583		A0A087WZY1	265 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583		A0A096LNT2	108 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	IGHV3-15	A0A0B4J1V0	119 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583		A0A1W2PNR3	127 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583		C9JVG2	144 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	EREG	O14944	169 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	SEC22B	O75396	215 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	RSL1D1	O76021	490 aa	Known RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	URI1	O94763	535 aa	Predicted RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	KCNH1	O95259	989 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	SYNGR4	O95473	234 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	ADA	P00813	363 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	PROC	P04070	461 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	TUBB	P07437	444 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	NGFR	P08138	427 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	FAM153B	P0C7A2	387 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	PRPS2	P11908	318 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	SDC1	P18827	310 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	ADH6	P28332	368 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	FRK	P42685	505 aa	Predicted RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	GSTM5	P46439	218 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	PSMD4	P55036	377 aa	Known RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	MANF	P55145	182 aa	Known RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	CARD18	P57730	90 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	RPS4X	P62701	263 aa	Known RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	ZNF117	Q03924	483 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	CKAP4	Q07065	602 aa	Known RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	DMTN	Q08495	405 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	ZNF239	Q16600	458 aa	Known RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	IMPG1	Q17R60	797 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	FAM153C	Q494X1	144 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	RFTN2	Q52LD8	501 aa	Predicted RBP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	SFRP5	Q5T4F7	317 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	HMBOX1	Q6NT76	420 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	ZYG11A	Q6WRX3	759 aa		5.19	□□□□□ -1.58
GYPB-205	ENST00000505583	FRMD7	Q6ZUT3	714 aa		5.19	□□□□□ -1.58

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