RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 C16orf58Q96GQ5 468 aa14.33□□□□□ -0.12
PDLIM7-213ENST00000505074 ZNF764Q96H86 408 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-213ENST00000505074 RNF145Q96MT1 663 aa14.33□□□□□ -0.12
PDLIM7-213ENST00000505074 C19orf24Q9BVV8 132 aa14.33□□□□□ -0.12
PDLIM7-213ENST00000505074 EML4Q9HC35 981 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-213ENST00000505074 ACSS1Q9NUB1 689 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-213ENST00000505074 LAMP3Q9UQV4 416 aa14.33□□□□□ -0.12
PDLIM7-213ENST00000505074 DNAJC15Q9Y5T4 150 aa14.33□□□□□ -0.12
PDLIM7-213ENST00000505074 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 A0A1W2PRB8 838 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 NPIPB8E9PQR5 432 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 TNFSF11O14788 317 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 CXCL13O43927 109 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 TBX19O60806 448 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 NUDT14O95848 222 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 CGAP01215 116 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 BCKDHAP12694 445 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 ATP6V1C1P21283 382 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 TBXA2RP21731 343 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 MAPK1P28482 360 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 ALDH3A1P30838 453 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 SLC6A8P48029 635 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 SERPINB4P48594 390 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 POU6F2P78424 691 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 IFFO1Q0D2I5 559 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 PDE7AQ13946 482 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 LASP1Q14847 261 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 SPDYE7PQ495Y7 208 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 ZAR1Q86SH2 424 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 MISPQ8IVT2 679 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 OR2W6PQ8NHA6 318 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 ZBTB8AQ96BR9 441 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 MTERF3Q96E29 417 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 GIMAP5Q96F15 307 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 FCRL1Q96LA6 429 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 MECRQ9BV79 373 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 UBQLN4Q9NRR5 601 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 MED17Q9NVC6 651 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 GIN1Q9NXP7 522 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 GIMAP2Q9UG22 337 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 TRAF6Q9Y4K3 522 aa14.32□□□□□ -0.12
PDLIM7-213ENST00000505074 SCAMP2O15127 329 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 PEX11AO75192 247 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 SPAG7O75391 227 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 NGFRP08138 427 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 RPL3P39023 403 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 MAP3K8P41279 467 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 FRKP42685 505 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 RNF144AP50876 292 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 TP53BP2Q13625 1128 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 TMEM44Q2T9K0 475 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 PLPPR5Q32ZL2 321 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 ARL13AQ5H913 290 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 PDSS1Q5T2R2 415 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 HBMQ6B0K9 141 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 ALKBH2Q6NS38 261 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 LRIG3Q6UXM1 1119 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 ZCCHC23Q6ZST2 131 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 C22orf34Q6ZV56 151 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 GTPBP8Q8N3Z3 284 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 ZNF614Q8N883 585 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 OR7A2PQ8NGA2 310 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 OR6K3Q8NGY3 331 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 OR2V1Q8NHB1 315 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 B4GALNT2Q8NHY0 566 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 PHOSPHO1Q8TCT1 267 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 CDS1Q92903 461 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 FAM120BQ96EK7 910 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 GMPPAQ96IJ6 420 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 PPP3R2Q96LZ3 170 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 NPAS1Q99742 590 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 C1orf50Q9BV19 199 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 FANCFQ9NPI8 374 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 FBXO34Q9NWN3 711 aa14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 PAQR5Q9NXK6 330 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-213ENST00000505074 KLF4O43474 513 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 NPHS1O60500 1241 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 SKAP2O75563 359 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 SLU7O95391 586 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 PLAUP00749 431 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 HMGN2P05204 90 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 SFTPDP35247 375 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 RAC1P63000 192 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 ATP6AP1LQ52LC2 224 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 CPTPQ5TA50 214 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 ZCCHC12Q6PEW1 402 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 RNF165Q6ZSG1 346 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 STK32CQ86UX6 486 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 HOMEZQ8IX15 550 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 ZNF527Q8NB42 609 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 HOXB13Q92826 284 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 REXO5Q96IC2 774 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 BTBD2Q9BX70 525 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 BEX2Q9BXY8 128 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 C12orf49Q9H741 205 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 NTMQ9P121 344 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 SLC17A7Q9P2U7 560 aa14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 FAF1Q9UNN5 650 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-213ENST00000505074 NPIPA5A0A0B4J1W7 369 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms