RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 FOXA1P55317 472 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 CTU2Q2VPK5 515 aaKnown RBP6.95□□□□□ -1.3
MATR3-210ENST00000504643 SFRP5Q5T4F7 317 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 HEPHL1Q6MZM0 1159 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 APOOLQ6UXV4 268 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 WFDC8Q8IUA0 241 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 ADAMTS15Q8TE58 950 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 RNF128Q8TEB7 428 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 OR5P2Q8WZ92 322 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 RNF145Q96MT1 663 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 HS3ST6Q96QI5 342 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 ACTRT3Q9BYD9 372 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 RTN4RQ9BZR6 473 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 SERINC1Q9NRX5 453 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 KLHL13Q9P2N7 655 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 ATP6V1HQ9UI12 483 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 KIAA1549Q9HCM3 1950 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 MED12LQ86YW9 2145 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 ACANP16112 2415 aa6.95□□□□□ -1.3
MATR3-210ENST00000504643 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 A0A0J9YW62 118 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 ZNF195O14628 629 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 TNFSF11O14788 317 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 TLX2O43763 284 aaPredicted RBP6.94□□□□□ -1.3
MATR3-210ENST00000504643 IGKV1D-16P01601 117 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 LINGO3P0C6S8 592 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 SLC6A8P48029 635 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 ATP12AP54707 1039 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 DSCR9P59020 149 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 RAC3P60763 192 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 ITGADQ13349 1161 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 PRSS53Q2L4Q9 553 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 EXOSC6Q5RKV6 272 aaKnown RBP6.94□□□□□ -1.3
MATR3-210ENST00000504643 NCMAPQ5T1S8 102 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 CDC73Q6P1J9 531 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 SZRD1Q7Z422 152 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 SLC16A11Q8NCK7 471 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 LRRN4CLQ8ND94 238 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 PHOSPHO1Q8TCT1 267 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 MZB1Q8WU39 189 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 AKAP1Q92667 903 aaKnown RBP eCLIP6.94□□□□□ -1.3
MATR3-210ENST00000504643 KISS1RQ969F8 398 aaPredicted RBP6.94□□□□□ -1.3
MATR3-210ENST00000504643 MUCL1Q96DR8 90 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 GIMAP5Q96F15 307 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 CHMP6Q96FZ7 201 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 EGLN2Q96KS0 407 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 POTEKPQ9BYX7 375 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 FBXO34Q9NWN3 711 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 TBK1Q9UHD2 729 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 MGAT4BQ9UQ53 548 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 NPHS1O60500 1241 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 CRLF1O75462 422 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 NUDT14O95848 222 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 AGR2O95994 175 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 ACP2P11117 423 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 PCSK6P29122 969 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 SELENBP1Q13228 472 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 MAD2L1Q13257 205 aaPredicted RBP6.94□□□□□ -1.3
MATR3-210ENST00000504643 ZNF239Q16600 458 aaKnown RBP6.94□□□□□ -1.3
MATR3-210ENST00000504643 NRF1Q16656 503 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 DUSP5Q16690 384 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 SLC25A53Q5H9E4 307 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 FIGNL1Q6PIW4 674 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 Q6ZSR9 355 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 FCRLAQ7L513 359 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 C17orf53Q8N3J3 647 aaPredicted RBP6.94□□□□□ -1.3
MATR3-210ENST00000504643 PSMA8Q8TAA3 256 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 SFXN5Q8TD22 340 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 TMEM234Q8WY98 164 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 ALG2Q9H553 416 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 ZCCHC3Q9NUD5 404 aaKnown RBP6.94□□□□□ -1.3
MATR3-210ENST00000504643 EMCNQ9ULC0 261 aa6.94□□□□□ -1.3
MATR3-210ENST00000504643 SPIN1Q9Y657 262 aaPredicted RBP6.94□□□□□ -1.3
MATR3-210ENST00000504643 TRIM64A6NGJ6 449 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 TRIM64BA6NI03 449 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 ZNF724A8MTY0 619 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 OVOL3O00110 214 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 AKAP10O43572 662 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 GUSBP08236 651 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 SDC1P18827 310 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 PAX7P23759 505 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 SLC7A1P30825 629 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 CCT3P49368 545 aaKnown RBP6.93□□□□□ -1.3
MATR3-210ENST00000504643 CSNK2A1P68400 391 aaPredicted RBP6.93□□□□□ -1.3
MATR3-210ENST00000504643 DMTNQ08495 405 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 CBFBQ13951 182 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 PDK3Q15120 406 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 CLEC12BQ2HXU8 276 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 KLHL26Q53HC5 615 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 ARL13AQ5H913 290 aaPredicted RBP6.93□□□□□ -1.3
MATR3-210ENST00000504643 KANK2Q63ZY3 851 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 Q6ZT83 130 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 KIRREL3Q8IZU9 778 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 GABRG1Q8N1C3 465 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 CIARTQ8N365 385 aaPredicted RBP6.93□□□□□ -1.3
MATR3-210ENST00000504643 PIWIL2Q8TC59 973 aaKnown RBP6.93□□□□□ -1.3
MATR3-210ENST00000504643 SMAP2Q8WU79 429 aaPredicted RBP6.93□□□□□ -1.3
MATR3-210ENST00000504643 JADE3Q92613 823 aa6.93□□□□□ -1.3
MATR3-210ENST00000504643 FAM120BQ96EK7 910 aaKnown RBP6.93□□□□□ -1.3
MATR3-210ENST00000504643 ZIM3Q96PE6 472 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms