RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 DEFB127Q9H1M4 99 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 TSPAN10Q9H1Z9 355 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 DSN1Q9H410 356 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 PTGES2Q9H7Z7 377 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 MED11Q9P086 117 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 SEC14L3Q9UDX4 400 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 FBXL2Q9UKC9 423 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC35A3Q9Y2D2 325 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 L3MBTL1Q9Y468 752 aa10.83□□□□□ -0.68
PDLIM5-208ENST00000504489 NCOA6Q14686 2063 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 A0A1B0GVC2 190 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF264O43296 627 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 EIF4E2O60573 245 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 TRAPPC6AO75865 159 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 CSTAP01040 98 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 THBS1P07996 1170 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 CELA3AP09093 270 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 UBL4AP11441 157 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 ESRRAP11474 423 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 NID1P14543 1247 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 IL7RP16871 459 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 DPP4P27487 766 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 PCGF2P35227 344 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 CPA2P48052 419 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 SUMO3P55854 103 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 PCBP3P57721 371 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 KCNJ10P78508 379 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 GANABQ14697 944 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 ZSWIM7Q19AV6 140 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 GLYR1Q49A26 553 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 RPS26P11Q5JNZ5 115 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 GFRALQ6UXV0 394 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 TRILQ7L0X0 811 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 EIF3MQ7L2H7 374 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 TRPM8Q7Z2W7 1104 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 ATCAYQ86WG3 371 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 CMIPQ8IY22 773 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC15A3Q8IY34 581 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 ZZZ3Q8IYH5 903 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 GATSQ8NAP1 163 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 FAM71CQ8NEG0 241 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 FAM83FQ8NEG4 500 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 TOR1AIP2Q8NFQ8 470 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 OR52P1PQ8NH57 321 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 B4GALNT2Q8NHY0 566 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 WDR60Q8WVS4 1066 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 C1GALT1C1Q96EU7 318 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 REXO5Q96IC2 774 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF583Q96ND8 569 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 LAT2Q9GZY6 243 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 CMTM6Q9NX76 183 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF232Q9UNY5 417 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 ANGPT4Q9Y264 503 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 IFT52Q9Y366 437 aa10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 INTS1Q8N201 2190 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-208ENST00000504489 TRGV5A0A0B4J1U4 118 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ANKUB1A6NFN9 424 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 FAM220BPB1ANY3 271 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 OIP5O43482 229 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 HCRTR2O43614 444 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ZIC3O60481 467 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 CDC40O60508 579 aaKnown RBP eCLIP10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 DNAJA2O60884 412 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 PDE9AO76083 593 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 T-ENOLP0DO92 83 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 PGM1P36871 562 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 P2RX1P51575 399 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 PSME3P61289 254 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF117Q03924 483 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 SKP2Q13309 424 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 LARS2Q15031 903 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 TOMM20Q15388 145 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 IGFBP7Q16270 282 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 VMACQ2NL98 169 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ARHGAP11AQ6P4F7 1023 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ERICH5Q6P6B1 374 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 CBLN3Q6UW01 205 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 KRT73Q86Y46 540 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 CHERPQ8IWX8 916 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 NEIL3Q8TAT5 605 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ARSGQ96EG1 525 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 SH3YL1Q96HL8 342 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF607Q96SK3 696 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 SPATA5L1Q9BVQ7 753 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 PIF1Q9H611 641 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 LDAHQ9H6V9 325 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 CACYBPQ9HB71 228 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 NDE1Q9NXR1 346 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ABCD2Q9UBJ2 740 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 DKKL1Q9UK85 242 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 ICAM5Q9UMF0 924 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 CARD8Q9Y2G2 431 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 LIPGQ9Y5X9 500 aa10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 GPC6Q9Y625 555 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-208ENST00000504489 A0A087WZY1 265 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 A0A1B0GTH9 108 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 OR14I1A6ND48 311 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 CCT8L1PA6NM43 557 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 CLDN24A6NM45 220 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms