RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 LMF1Q96S06 567 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 UBQLN3Q9H347 655 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 FGF20Q9NP95 211 aaPredicted RBP8.36□□□□□ -1.07
LINC02239-201ENST00000504339 LANCL2Q9NS86 450 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 DNAJB12Q9NXW2 375 aaKnown RBP8.36□□□□□ -1.07
LINC02239-201ENST00000504339 WNT16Q9UBV4 365 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 KLHL3Q9UH77 587 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 PLCL2Q9UPR0 1127 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 SEC16AO15027 2179 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 WDFY3Q8IZQ1 3526 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 ARID1BQ8NFD5 2236 aaPredicted RBP8.36□□□□□ -1.07
LINC02239-201ENST00000504339 HTR3EA5X5Y0 456 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 TLCD2A6NGC4 264 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 BHLHE40O14503 412 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 FMO6PO60774 539 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 AK1P00568 194 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 CD1CP29017 333 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 OR1D5P58170 312 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 FUT7Q11130 342 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 ZNF404Q494X3 552 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 ZNF362Q5T0B9 420 aaPredicted RBP8.36□□□□□ -1.07
LINC02239-201ENST00000504339 B3GLCTQ6Y288 498 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 USP43Q70EL4 1123 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 RRM2BQ7LG56 351 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 RANBP3LQ86VV4 465 aaPredicted RBP8.36□□□□□ -1.07
LINC02239-201ENST00000504339 ZNF595Q8IYB9 648 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 SPEM1Q8N4L4 309 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 AMER2Q8N7J2 671 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 ZNF321PQ8N8H1 164 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 TOR1AIP2Q8NFQ8 470 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 OR4C3Q8NH37 302 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 OR51Q1Q8NH59 317 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 C16orf52Q8NHV5 167 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 MCFD2Q8NI22 146 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 TMEM239Q8WW34 195 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 DNASE2BQ8WZ79 361 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 OSTF1Q92882 214 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 CLDN23Q96B33 292 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 RNFT2Q96EX2 444 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 MMABQ96EY8 250 aaPredicted RBP8.36□□□□□ -1.07
LINC02239-201ENST00000504339 PTCHD1Q96NR3 888 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 ZNF426Q9BUY5 554 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 MND1Q9BWT6 205 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 HCAR1Q9BXC0 346 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 BARHL1Q9BZE3 327 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 PCED1AQ9H1Q7 454 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 HINT3Q9NQE9 182 aaKnown RBP8.36□□□□□ -1.07
LINC02239-201ENST00000504339 POLE3Q9NRF9 147 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 PRTFDC1Q9NRG1 225 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 SIDT1Q9NXL6 827 aaKnown RBP8.36□□□□□ -1.07
LINC02239-201ENST00000504339 NLGN3Q9NZ94 848 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 LRIT1Q9P2V4 623 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 EPHA6Q9UF33 1036 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 CBLCQ9ULV8 474 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 CSNK1G3Q9Y6M4 447 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 CDH10Q9Y6N8 788 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 MAU2Q9Y6X3 613 aa8.36□□□□□ -1.07
LINC02239-201ENST00000504339 A0A0B4J2E0 115 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 A0A1B0GX12 115 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 FAM183AA6NL82 134 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 UPK1BO75841 260 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 RAB36O95755 333 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 LALBAP00709 142 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 MLLT3P42568 568 aaPredicted RBP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 GCGRP47871 477 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 MTNR1AP48039 350 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 HNRNPKP61978 463 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 CSTF1Q05048 431 aaKnown RBP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 PRKCDQ05655 676 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 STX4Q12846 297 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 NDUFAF6Q330K2 333 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 MINDY4Q4G0A6 757 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 C3orf38Q5JPI3 329 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 LIPKQ5VXJ0 399 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 SLC36A4Q6YBV0 504 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 HSDL2Q6YN16 418 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 GRAMD2AQ8IUY3 354 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 CLDN22Q8N7P3 220 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 OR4F15Q8NGB8 312 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 BRIX1Q8TDN6 353 aaKnown RBP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 RBM18Q96H35 190 aaKnown RBP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 TIMP4Q99727 224 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 CHRNA10Q9GZZ6 450 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 RAB33BQ9H082 229 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 TRIM45Q9H8W5 580 aaPredicted RBP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 NDUFB11Q9NX14 153 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 ERVK-19Q9WJR5 959 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 MRPS17Q9Y2R5 130 aaKnown RBP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 YARS2Q9Y2Z4 477 aaKnown RBP8.35□□□□□ -1.07
LINC02239-201ENST00000504339 CACNA1IQ9P0X4 2223 aa8.35□□□□□ -1.07
LINC02239-201ENST00000504339 IGHV1OR21-1A0A087WYE8 117 aa8.34□□□□□ -1.07
LINC02239-201ENST00000504339 A0A1B0GWA3 101 aa8.34□□□□□ -1.07
LINC02239-201ENST00000504339 ZC3H12DA2A288 527 aaKnown RBP8.34□□□□□ -1.07
LINC02239-201ENST00000504339 J3QRE1 110 aa8.34□□□□□ -1.07
LINC02239-201ENST00000504339 SOCS6O14544 535 aa8.34□□□□□ -1.07
LINC02239-201ENST00000504339 PTP4A3O75365 173 aa8.34□□□□□ -1.07
LINC02239-201ENST00000504339 DCNP07585 359 aaKnown RBP8.34□□□□□ -1.07
LINC02239-201ENST00000504339 GUSBP08236 651 aa8.34□□□□□ -1.07
LINC02239-201ENST00000504339 CSF2RBP32927 897 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms