RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 CBLCQ9ULV8 474 aa16.62■□□□□ 0.25
SDHA-204ENST00000504309 YARS2Q9Y2Z4 477 aaKnown RBP16.62■□□□□ 0.25
SDHA-204ENST00000504309 EXOSC1Q9Y3B2 195 aaKnown RBP16.62■□□□□ 0.25
SDHA-204ENST00000504309 PEX16Q9Y5Y5 336 aa16.62■□□□□ 0.25
SDHA-204ENST00000504309 NUP210LQ5VU65 1888 aa16.62■□□□□ 0.25
SDHA-204ENST00000504309 SOCS6O14544 535 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 HNRNPCP07910 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
SDHA-204ENST00000504309 SLC1A3P43003 542 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 BCAP31P51572 246 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 RACK1P63244 317 aaKnown RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 PLEKHG7Q6ZR37 379 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 PARP16Q8N5Y8 322 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 TMEM203Q969S6 136 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 PPP1R14BQ96C90 147 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 MMABQ96EY8 250 aaPredicted RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 SPACA7Q96KW9 195 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 PTCHD1Q96NR3 888 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 CD180Q99467 661 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 NUAK2Q9H093 628 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 CHRDQ9H2X0 955 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 MEPEQ9NQ76 525 aaPredicted RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 C14orf105Q9NVL8 296 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 CHCHD3Q9NX63 227 aaKnown RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 DNAJB12Q9NXW2 375 aaKnown RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 SDK1Q7Z5N4 2213 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 A0A0B4J2E0 115 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 A0A1B0GX12 115 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 FER1L5A0AVI2 2057 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 BHLHE40O14503 412 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 AQP9O43315 295 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 TBX1O43435 398 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 RFPL3O75679 317 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 TSPAN19P0C672 248 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 COL5A1P20908 1838 aaPredicted RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 FNTBP49356 437 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 BNC1Q01954 994 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 RPL6Q02878 288 aaKnown RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 ZNF267Q14586 743 aaPredicted RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 SMAD2Q15796 467 aaKnown RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 AMZ1Q400G9 498 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 ZNF613Q6PF04 617 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 LHFPL3Q86UP9 236 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 C17orf82Q86X59 251 aaPredicted RBP16.61■□□□□ 0.25
SDHA-204ENST00000504309 CPOQ8IVL8 374 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 UNC13CQ8NB66 2214 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 ZNF485Q8NCK3 441 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 OR6C4Q8NGE1 309 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 OR13C2Q8NGS9 318 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 BPIFA2Q96DR5 249 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 HS6ST2Q96MM7 605 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 DGAT2Q96PD7 388 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 ZNF559Q9BR84 538 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 ABCB10Q9NRK6 738 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 SSR3Q9UNL2 185 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 PLCL2Q9UPR0 1127 aa16.61■□□□□ 0.25
SDHA-204ENST00000504309 ADAMTS20P59510 1910 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 TLCD2A6NGC4 264 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 HMGN1P05114 100 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 HTR1FP30939 366 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 GPR3P46089 330 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 ZNF45Q02386 682 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 TMEM44Q2T9K0 475 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 SMARCD3Q6STE5 483 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 THSD4Q6ZMP0 1018 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 CXXC5Q7LFL8 322 aaKnown RBP16.6■□□□□ 0.25
SDHA-204ENST00000504309 LYSMD2Q8IV50 215 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 RCBTB1Q8NDN9 531 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 OR52L1Q8NGH7 329 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 HSPA12BQ96MM6 686 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 TXNL4BQ9NX01 149 aaKnown RBP16.6■□□□□ 0.25
SDHA-204ENST00000504309 KLHL3Q9UH77 587 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 ERVK-19Q9WJR5 959 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 A0A1B0GWA3 101 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 CTDSP2O14595 271 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 PLD2O14939 933 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 CHP2O43745 196 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 PRAMEF2O60811 474 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 ACAA2P42765 397 aaKnown RBP16.6■□□□□ 0.25
SDHA-204ENST00000504309 PGDP52209 483 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 RPS25P62851 125 aaKnown RBP16.6■□□□□ 0.25
SDHA-204ENST00000504309 DBPQ10586 325 aaPredicted RBP16.6■□□□□ 0.25
SDHA-204ENST00000504309 GARNL3Q5VVW2 1013 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 NKAIN2Q5VXU1 208 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 LAPTM4BQ86VI4 370 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 GRAMD2AQ8IUY3 354 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 SIRT6Q8N6T7 355 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 FAM83FQ8NEG4 500 aaPredicted RBP16.6■□□□□ 0.25
SDHA-204ENST00000504309 ADAMTS18Q8TE60 1221 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 OTULINQ96BN8 352 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 ARHGAP9Q9BRR9 750 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 ZNF649Q9BS31 505 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 RERGLQ9H628 205 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 TMEM27Q9HBJ8 222 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 SMURF1Q9HCE7 757 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 SNTG1Q9NSN8 517 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 UCKL1Q9NWZ5 548 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 FBXL21Q9UKT6 434 aa16.6■□□□□ 0.25
SDHA-204ENST00000504309 SF3B6Q9Y3B4 125 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms