RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 PHOSPHO1Q8TCT1 267 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 PMM1Q92871 262 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 TMEM41AQ96HV5 264 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 ZNF583Q96ND8 569 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 FRMD6Q96NE9 622 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 KCTD14Q9BQ13 255 aaPredicted RBP9.15□□□□□ -0.94
NUP54-203ENST00000504173 QRSL1Q9H0R6 528 aaKnown RBP9.15□□□□□ -0.94
NUP54-203ENST00000504173 MTHFD2LQ9H903 347 aaPredicted RBP9.15□□□□□ -0.94
NUP54-203ENST00000504173 BCL2L10Q9HD36 194 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 TMEM181Q9P2C4 612 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 ABCD2Q9UBJ2 740 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 SUCOQ9UBS9 1254 aaKnown RBP9.15□□□□□ -0.94
NUP54-203ENST00000504173 USP22Q9UPT9 525 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 DTNAQ9Y4J8 743 aa9.15□□□□□ -0.94
NUP54-203ENST00000504173 EML6Q6ZMW3 1958 aa9.15□□□□□ -0.95
NUP54-203ENST00000504173 DSPPQ9NZW4 1301 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 ATRQ13535 2644 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 ELOVL7A1L3X0 281 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 SERINC4A6NH21 518 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 AGAP5A6NIR3 686 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 LRRC3CA6NJW4 275 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 GTPBP1O00178 669 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 DNAJA2O60884 412 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 PDE9AO76083 593 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 CRYABP02511 175 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 DBIP07108 87 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 ZNF24P17028 368 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 ENDOUP21128 410 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 RPS4Y1P22090 263 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 AQP1P29972 269 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 CPOXP36551 454 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 GSK3BP49841 420 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 GAS1P54826 345 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 PPIAP62937 165 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 ALDH6A1Q02252 535 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 FOXO1Q12778 655 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 BNIP1Q12981 228 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 FGFBP1Q14512 234 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 CD226Q15762 336 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 MAPK14Q16539 360 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 VMACQ2NL98 169 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 KLHL26Q53HC5 615 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 SAMD4BQ5PRF9 694 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 OR5M10Q6IEU7 315 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 C6orf89Q6UWU4 347 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 BNC2Q6ZN30 1099 aaPredicted RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 SLC22A16Q86VW1 577 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 MISPQ8IVT2 679 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 MICU2Q8IYU8 434 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 CISD2Q8N5K1 135 aaKnown RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 OR4K17Q8NGC6 315 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 OR1J4Q8NGS1 313 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 OR52P1PQ8NH57 321 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 DUSP19Q8WTR2 217 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 WDR60Q8WVS4 1066 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 OIT3Q8WWZ8 545 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 ZG16BQ96DA0 208 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 TAAR6Q96RI8 345 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 ZNF607Q96SK3 696 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 TTTY12Q9BZ98 90 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 RTN4RQ9BZR6 473 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 ALG2Q9H553 416 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 HHATLQ9HCP6 504 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 ZFP64Q9NPA5 681 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.14□□□□□ -0.95
NUP54-203ENST00000504173 B4GALT7Q9UBV7 327 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 KCNE5Q9UJ90 142 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 PACSIN3Q9UKS6 424 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 NINQ8N4C6 2090 aa9.14□□□□□ -0.95
NUP54-203ENST00000504173 C17orf51A8MQB3 221 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 FAM166BA8MTA8 275 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 EBAG9O00559 213 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 ADAM10O14672 748 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 TFECO14948 347 aaPredicted RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 GSTA4O15217 222 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 HCRTR2O43614 444 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 GMFGO60234 142 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 SERPINB7O75635 380 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 CYP7B1O75881 506 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 GLSO94925 669 aaPredicted RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 CSTAP01040 98 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 UBL4AP11441 157 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 ETS2P15036 469 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 IL7RP16871 459 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 GDF1P27539 372 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 C17orf67Q0P5P2 114 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 VEZF1Q14119 521 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 LARS2Q15031 903 aaKnown RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 TOMM20Q15388 145 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 NDUFAF6Q330K2 333 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 DNAL1Q4LDG9 190 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 LIN52Q52LA3 116 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 ZNF311Q5JNZ3 666 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 FNDC7Q5VTL7 733 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 AP1ARQ63HQ0 302 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 TIGD3Q6B0B8 471 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 EIF3MQ7L2H7 374 aaKnown RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 PATL1Q86TB9 770 aaKnown RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 VRK2Q86Y07 508 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms