RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 SMAD1Q15797 465 aaKnown RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 RBBP7Q16576 425 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 HAGHQ16775 308 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 EML3Q32P44 896 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 RFTN2Q52LD8 501 aaPredicted RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 USP39Q53GS9 565 aaKnown RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 ZNF789Q5FWF6 425 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 PYY3Q5JQD4 70 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SPANXN4Q5MJ08 99 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 ARMC12Q5T9G4 340 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 TBC1D3CQ6IPX1 549 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 ZNF770Q6IQ21 691 aaPredicted RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 MRNIPQ6NTE8 343 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 DOK6Q6PKX4 331 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 IL27RAQ6UWB1 636 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 ZNF783Q6ZMS7 281 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 MBOAT1Q6ZNC8 495 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 OR2W3Q7Z3T1 314 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 C6orf120Q7Z4R8 191 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 MARCH9Q86YJ5 346 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 VRK3Q8IV63 474 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SLC30A8Q8IWU4 369 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 LRRC56Q8IYG6 542 aaPredicted RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 GPR65Q8IYL9 337 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 TBC1D3Q8IZP1 549 aaPredicted RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 LINC00471Q8N535 108 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 OR9A4Q8NGU2 314 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 OR2G2Q8NGZ5 317 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 OR4K15Q8NH41 348 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 NEIL3Q8TAT5 605 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 FAM216AQ8WUB2 273 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SMIM4Q8WVI0 70 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 MAFIPQ8WZ33 124 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 MRPS31Q92665 395 aaKnown RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 FGF11Q92914 225 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 RFKQ969G6 155 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SAT2Q96F10 170 aaPredicted RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 RRNAD1Q96FB5 475 aaKnown RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 MISP3Q96FF7 219 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SMARCD1Q96GM5 515 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 PIWIL1Q96J94 861 aaKnown RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 ZFP42Q96MM3 310 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 ZDHHC15Q96MV8 337 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 NPY6RQ99463 290 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 NIPSNAP1Q9BPW8 284 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 C19orf43Q9BQ61 176 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 MRPL45Q9BRJ2 306 aaKnown RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 CFHR5Q9BXR6 569 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 TLNRD1Q9H1K6 362 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 OPN3Q9H1Y3 402 aaPredicted RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 OR52A5Q9H2C5 316 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 UBQLN3Q9H347 655 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 CDCP1Q9H5V8 836 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SFXN1Q9H9B4 322 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SEC61A2Q9H9S3 476 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 ASCL3Q9NQ33 180 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 RXFP3Q9NSD7 469 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 MAN2C1Q9NTJ4 1040 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 ACER3Q9NUN7 267 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 UQCC1Q9NVA1 299 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 DZANK1Q9NVP4 752 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 TAS2R13Q9NYV9 303 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 NLGN3Q9NZ94 848 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 NUDT4Q9NZJ9 180 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 RCC2Q9P258 522 aaKnown RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 GALPQ9UBC7 116 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 DHCR7Q9UBM7 475 aaKnown RBP5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SLC2A6Q9UGQ3 507 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 SIX4Q9UIU6 781 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 GOLT1BQ9Y3E0 138 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 PCDHB1Q9Y5F3 818 aa5.59□□□□□ -1.51
LINC01340-201ENST00000504012 STRCP1A6NGW2 1772 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 A0A1B0GTL3 188 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 KDM4FA0A1W2PPD8 638 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 KANTRA0A1W2PQU2 76 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM200CA6NKL6 621 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 HEPACAM2A8MVW5 462 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 A8MXE2 369 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM229AB2RXF0 380 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 HSBP1L1C9JCN9 74 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 H7C4K7 107 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 DDX39AO00148 427 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 MFNGO00587 321 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 GABRPO00591 440 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SMAD7O15105 426 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 MATN3O15232 486 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SIGLEC5O15389 551 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ARPC5O15511 151 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 EMC8O43402 210 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 HCRTR2O43614 444 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 OR1I1O60431 355 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TSPAN2O60636 221 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 MSCO60682 206 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 KHDRBS3O75525 346 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 CBR3O75828 277 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 GATBO75879 557 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 RGS9O75916 674 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 DIRAS1O95057 198 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 NDUFB6O95139 128 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SLC25A27O95847 323 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms