RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SLC38A5Q8WUX1 472 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC35F5Q8WV83 523 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CACNG8Q8WXS5 425 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC38A4Q969I6 547 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 LRRC45Q96CN5 670 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CERS2Q96G23 380 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 AKR1E2Q96JD6 320 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 ELMO2Q96JJ3 720 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 TGS1Q96RS0 853 aaKnown RBP3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 S1PR3Q99500 378 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 MAP3K3Q99759 626 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SH2D3AQ9BRG2 576 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 HINT2Q9BX68 163 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 IL22Q9GZX6 179 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 LRMDAQ9H2I8 198 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 ELOVL6Q9H5J4 265 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC38A10Q9HBR0 1119 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF701Q9NV72 531 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SMARCAL1Q9NZC9 954 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 GNG12Q9UBI6 72 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 POMT2Q9UKY4 750 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 ABCG2Q9UNQ0 655 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 PPIAL4AQ9Y536 164 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 TTC28Q96AY4 2481 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 KIR2DS5A0A0G2JLQ3 304 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 LINC01548A6NM66 108 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 H3BTX0 84 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 KIR2DS3K7RE56 304 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 OVOL3O00110 214 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 WNT9BO14905 357 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 STX7O15400 261 aaKnown RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 KDELR3O43731 214 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 SH3BGRLO75368 114 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 STK17BO94768 372 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR2F2O95006 317 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 CTSAP10619 480 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 CCL2P13500 99 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ATP1B2P14415 290 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 POU2F1P14859 743 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 UQCRBP14927 111 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 CAPN2P17655 700 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ACKR3P25106 362 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 RRM2P31350 389 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 MMP12P39900 470 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 MAGEA5P43359 124 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ARRB1P49407 418 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 CCNHP51946 323 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 CCNG1P51959 295 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ATP1B3P54709 279 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 INHBCP55103 352 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ELLP55199 621 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 RAG2P55895 527 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 CLDN17P56750 224 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 GSCP56915 257 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 HERVK_113P63132 956 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 SKP1P63208 163 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ID2Q02363 134 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 SRYQ05066 204 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF91Q05481 1191 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZFP36L1Q07352 338 aaKnown RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ST3GAL1Q11201 340 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 TRAP1Q12931 704 aaKnown RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ITIH4Q14624 930 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF699Q32M78 642 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 PAGE2BQ5JRK9 111 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 EFHC1Q5JVL4 640 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF776Q68DI1 518 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 RHBDD2Q6NTF9 364 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 DHRS11Q6UWP2 260 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 DEF8Q6ZN54 512 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 DPY19L2P2Q6ZN68 376 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 COLCA1Q6ZS62 124 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 STXBP4Q6ZWJ1 553 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 TRMT10CQ7L0Y3 403 aaKnown RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 GPR142Q7Z601 462 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 PTOV1Q86YD1 416 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 LDLRAD3Q86YD5 345 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 CHERPQ8IWX8 916 aaKnown RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 GPR65Q8IYL9 337 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 CDK20Q8IZL9 346 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 PYROXD2Q8N2H3 581 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 PARP8Q8N3A8 854 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 RNF10Q8N5U6 811 aaKnown RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR5T3Q8NGG3 340 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR51L1Q8NGJ5 315 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR1L6Q8NGR2 347 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 NANPQ8TBE9 248 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 FAM110BQ8TC76 370 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 GPR148Q8TDV2 347 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ARNTL2Q8WYA1 636 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC35C1Q96A29 364 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ASB9Q96DX5 294 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF317Q96PQ6 595 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC38A2Q96QD8 506 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ERGIC2Q96RQ1 377 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 COPS8Q99627 209 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 WDR77Q9BQA1 342 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 ERVK-6Q9BXR3 956 aa3.85□□□□□ -1.79
HMGB1P21-201ENST00000502313 NDEL1Q9GZM8 345 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms