RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CSNK1G2P78368 415 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CHRNDQ07001 517 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PNRC1Q12796 327 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 RASGRF1Q13972 1273 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TSNQ15631 228 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 SULT1C3Q6IMI6 304 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TRMT11Q7Z4G4 463 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 ARL14Q8N4G2 192 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TMEM105Q8N8V8 129 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 OR8K5Q8NH50 307 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DEPTORQ8TB45 409 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TRMT10AQ8TBZ6 339 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 TSACCQ96A04 125 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 GPR146Q96CH1 333 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HAVCR1Q96D42 359 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FAM120BQ96EK7 910 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 SAMD8Q96LT4 415 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GFI1Q99684 422 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PDCD2LQ9BRP1 358 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC35A5Q9BS91 424 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 INPP5KQ9BT40 448 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 IDI2Q9BXS1 227 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DUSP15Q9H1R2 295 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 PRKRIP1Q9H875 184 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 NHEJ1Q9H9Q4 299 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 SAYSD1Q9NPB0 183 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF71Q9NQZ8 489 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 DUSP22Q9NRW4 184 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C14orf105Q9NVL8 296 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DNAJB11Q9UBS4 358 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MTFP1Q9UDX5 166 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LAMP3Q9UQV4 416 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HBS1LQ9Y450 684 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 LOXL2Q9Y4K0 774 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LIPGQ9Y5X9 500 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EPN1Q9Y6I3 576 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 STAB1Q9NY15 2570 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ANKRD34BA5PLL1 514 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF705GA8MUZ8 300 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 E9PI62 339 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 H7C1Q1 480 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GMFGO60234 142 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RCBTB2O95199 551 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 EOMESO95936 686 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MT-ND4P03905 459 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CELA3AP09093 270 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SCG2P13521 617 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CD99P14209 185 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PSMC3P17980 439 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ERCC2P18074 760 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PPM1AP35813 382 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GGT2P36268 569 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SULT1A1P50225 295 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ARFIP1P53367 373 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TAS2R50P59544 299 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RPS4XP62701 263 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 POU5F1BQ06416 359 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ACSM1Q08AH1 577 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SEMA5AQ13591 1074 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TRA2AQ13595 282 aaKnown RBP eCLIP1.3□□□□□ -2.2
XRN1-214ENST00000498077 RUNX3Q13761 415 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TAF11Q15544 211 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GUK1Q16774 197 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PTCHD3Q3KNS1 767 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 Q3ZCU0 254 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ARMC12Q5T9G4 340 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CUZD1Q86UP6 607 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SLC47A2Q86VL8 602 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GLCCI1Q86VQ1 547 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RANBP3LQ86VV4 465 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 THNSL1Q8IYQ7 743 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 DAW1Q8N136 415 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 OR9A2Q8NGT5 310 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMEM163Q8TC26 289 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 AQP3Q92482 292 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GTF3C6Q969F1 213 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 C11orf24Q96F05 449 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 PLPPR2Q96GM1 343 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMEM19Q96HH6 336 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ATP6V0BQ99437 205 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SORT1Q99523 831 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MTG1Q9BT17 334 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 DCTN5Q9BTE1 182 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 COA1Q9GZY4 146 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MIS12Q9H081 205 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 WFDC10AQ9H1F0 79 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GORASP2Q9H8Y8 452 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MID1IP1Q9NPA3 183 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RIC8AQ9NPQ8 531 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ARHGEF4Q9NR80 690 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MED29Q9NX70 200 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MTRRQ9UBK8 725 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PEMTQ9UBM1 199 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CHRNA9Q9UGM1 479 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 C3orf18Q9UK00 162 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ENTPD4Q9Y227 616 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SNX8Q9Y5X2 465 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SPIN1Q9Y657 262 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 STON1Q9Y6Q2 735 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZMYM6O95789 1325 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms