RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 WDR88Q6ZMY6 472 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 ARMCX2Q7L311 632 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 MSANTD4Q8NCY6 345 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 STKLD1Q8NE28 680 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 NEIL3Q8TAT5 605 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 SLC5A11Q8WWX8 675 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 DCUN1D4Q92564 292 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 MYDGFQ969H8 173 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 SDSLQ96GA7 329 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 RUFY1Q96T51 708 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 MCHR1Q99705 422 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 CITED1Q99966 193 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 TMEM121Q9BTD3 319 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 SRXN1Q9BYN0 137 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 CHIAQ9BZP6 476 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 ALDH8A1Q9H2A2 487 aaPredicted RBP2.08□□□□□ -2.08
SMC4-227ENST00000497984 NANSQ9NR45 359 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 C1orf123Q9NWV4 160 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 CNOT2Q9NZN8 540 aaKnown RBP2.08□□□□□ -2.08
SMC4-227ENST00000497984 IFT52Q9Y366 437 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 A0A0J9YXY3 114 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 SYCE3A1L190 88 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 LRRC30A6NM36 301 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 WASH3PC4AMC7 463 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 K7N7A8 449 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 CSF2P04141 144 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 IGHV4-34P06331 123 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 GSTT2P0CG29 244 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 GSTT2BP0CG30 244 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 TOP1P11387 765 aaKnown RBP2.07□□□□□ -2.08
SMC4-227ENST00000497984 ZNF44P15621 663 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 ATP5A1P25705 553 aaKnown RBP2.07□□□□□ -2.08
SMC4-227ENST00000497984 CD1BP29016 333 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 AQP1P29972 269 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 PRDX6P30041 224 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 HTR1FP30939 366 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 AKT2P31751 481 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 HPDP32754 393 aaPredicted RBP2.07□□□□□ -2.08
SMC4-227ENST00000497984 ZNF630Q2M218 657 aaPredicted RBP2.07□□□□□ -2.08
SMC4-227ENST00000497984 ARSKQ6UWY0 536 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 WASH2PQ6VEQ5 465 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 LPCAT2Q7L5N7 544 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 C20orf203Q8NBC4 194 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 SUMF2Q8NBJ7 301 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 MINDY2Q8NBR6 621 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 ZNF540Q8NDQ6 660 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 OR2T33Q8NG76 320 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 OR56B1Q8NGI3 324 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 SLC13A3Q8WWT9 602 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 MBOAT4Q96T53 435 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 ARHGDIGQ99819 225 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 ACAT2Q9BWD1 397 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 POLR3FQ9H1D9 316 aaPredicted RBP2.07□□□□□ -2.08
SMC4-227ENST00000497984 NARFLQ9H6Q4 476 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 PLA2G4CQ9UP65 541 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 MAB21L2Q9Y586 359 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 CACNG2Q9Y698 323 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 WSB1Q9Y6I7 421 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 LTBP1Q14766 1721 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 UBE4BO95155 1302 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 RPGRIP1LQ68CZ1 1315 aa2.07□□□□□ -2.08
SMC4-227ENST00000497984 ZNF705EA8MWA4 302 aaPredicted RBP2.06□□□□□ -2.08
SMC4-227ENST00000497984 ZNF264O43296 627 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 SNAI2O43623 268 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 NPIPB7O75200 414 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 ECI2O75521 394 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 BCAS2O75934 225 aaPredicted RBP2.06□□□□□ -2.08
SMC4-227ENST00000497984 BAG2O95816 211 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 SLC4A1P02730 911 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 HBQ1P09105 142 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 CCDC192P0DO97 292 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 CLUP10909 449 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 ANXA3P12429 323 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 SERPINA2P20848 420 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 NUDT1P36639 197 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 CTRLP40313 264 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 ATXN3P54252 364 aaPredicted RBP2.06□□□□□ -2.08
SMC4-227ENST00000497984 EXOSC2Q13868 293 aaKnown RBP2.06□□□□□ -2.08
SMC4-227ENST00000497984 OR6B2Q6IFH4 312 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 UNQ9370/PRO34162Q6UXP9 181 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 TMEM26Q6ZUK4 368 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 ANKRD37Q7Z713 158 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 EFCAB13Q8IY85 973 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 TMEM252Q8N6L7 170 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 C14orf79Q96F83 325 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 XPO4Q9C0E2 1151 aaKnown RBP2.06□□□□□ -2.08
SMC4-227ENST00000497984 NXF3Q9H4D5 531 aaKnown RBP2.06□□□□□ -2.08
SMC4-227ENST00000497984 ANO10Q9NW15 660 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 MRPL39Q9NYK5 338 aaKnown RBP2.06□□□□□ -2.08
SMC4-227ENST00000497984 UBQLN1Q9UMX0 589 aaKnown RBP2.06□□□□□ -2.08
SMC4-227ENST00000497984 AP4B1Q9Y6B7 739 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 CUX2O14529 1486 aa2.06□□□□□ -2.08
SMC4-227ENST00000497984 IGKV2D-24A0A075B6R9 120 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 TRBV6-6A0A0A6YYG2 114 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 KIR2DL5BA0A0G2JN68 375 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 KIR2DL5BA0A0G2JPC4 375 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.05□□□□□ -2.08
SMC4-227ENST00000497984 A0A1B0GWB2 263 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.05□□□□□ -2.08
SMC4-227ENST00000497984 LRCOL1A6NCL2 159 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms