RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 OR56A1Q8NGH5 318 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 OR2W6PQ8NHA6 318 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 OR2V1Q8NHB1 315 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 AGR3Q8TD06 166 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 ADAMTS15Q8TE58 950 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 OR5P2Q8WZ92 322 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 CDS1Q92903 461 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 OTUB1Q96FW1 271 aaPredicted RBP10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 REXO5Q96IC2 774 aaKnown RBP10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 CCL19Q99731 98 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 PIGUQ9H490 435 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 TIGARQ9NQ88 270 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 FBXO34Q9NWN3 711 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 GIN1Q9NXP7 522 aa10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 FAF1Q9UNN5 650 aaPredicted RBP10.54□□□□□ -0.72
NUDCD3-211ENST00000497978 GJE1A6NN92 205 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 FAM171A2A8MVW0 826 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 TNFSF11O14788 317 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 SIAH2O43255 324 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 SPAG7O75391 227 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 SLU7O95391 586 aaKnown RBP10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 NUDT14O95848 222 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 OPN1LWP04000 364 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 INHBBP09529 407 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 LAMP1P11279 417 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 IL11P20809 199 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 CCT3P49368 545 aaKnown RBP10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 CARD18P57730 90 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 TP53BP2Q13625 1128 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 CTU2Q2VPK5 515 aaKnown RBP10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 ANKRD34AQ69YU3 496 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 CDC73Q6P1J9 531 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 BEND4Q6ZU67 534 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 ZAR1Q86SH2 424 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 LILRA2Q8N149 483 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 FNDC5Q8NAU1 212 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 PHOSPHO1Q8TCT1 267 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 TCP10LQ8TDR4 215 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 OSTF1Q92882 214 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 MOAP1Q96BY2 351 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 ADGRG7Q96K78 797 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 MECRQ9BV79 373 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 ACTRT3Q9BYD9 372 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 TMEM185BQ9H7F4 350 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 SIRT3Q9NTG7 399 aaPredicted RBP10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 SLC17A7Q9P2U7 560 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 CLEC4AQ9UMR7 237 aa10.53□□□□□ -0.72
NUDCD3-211ENST00000497978 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.72
NUDCD3-211ENST00000497978 ACANP16112 2415 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 A0A0J9YW62 118 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 POM121CA8CG34 1229 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 GTPBP1O00178 669 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 CFLARO15519 480 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 TUBBP07437 444 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 NUDT17P0C025 328 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 HOXB4P17483 251 aaPredicted RBP10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 PRPS1L1P21108 318 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 PSMA4P25789 261 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 ELK4P28324 431 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 ADH6P28332 368 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 SUMO3P55854 103 aaPredicted RBP10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 MAD2L1Q13257 205 aaPredicted RBP10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 PTGR1Q14914 329 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 CD226Q15762 336 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 XKR7Q5GH72 579 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 BEX5Q5H9J7 111 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 Q5PR19 223 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 EXOSC6Q5RKV6 272 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 C6orf136Q5SQH8 315 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 DCST2Q5T1A1 773 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 IL23RQ5VWK5 629 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 BHLHB9Q6PI77 547 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 ZCCHC23Q6ZST2 131 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 SFXN5Q8TD22 340 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 KLHL15Q96M94 604 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 NPAS1Q99742 590 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 C1orf50Q9BV19 199 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 ROPN1BQ9BZX4 212 aaPredicted RBP10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 L2HGDHQ9H9P8 463 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 ROPN1Q9HAT0 212 aaPredicted RBP10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 GIMAP2Q9UG22 337 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 LGALS13Q9UHV8 139 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 ZFHX3Q15911 3703 aa10.52□□□□□ -0.73
NUDCD3-211ENST00000497978 SKAP2O75563 359 aaPredicted RBP10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 C6orf47O95873 294 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 LINGO3P0C6S8 592 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 SFTPDP35247 375 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 P2RX1P51575 399 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 ATP12AP54707 1039 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 NR1H2P55055 460 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 ZNF117Q03924 483 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 LTBQ06643 244 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 FOXF1Q12946 379 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 RNPS1Q15287 305 aaKnown RBP10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 KLHL26Q53HC5 615 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 TMEM201Q5SNT2 666 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 CLEC9AQ6UXN8 241 aa10.51□□□□□ -0.73
NUDCD3-211ENST00000497978 STAC2Q6ZMT1 411 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms