RNA–Protein interactions for RNA: ENST00000497586.5

SFMBT1-208, Transcript of Scm like with four mbt domains 1, human

TSL 4

Gene SFMBT1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFMBT1-208	ENST00000497586	MYO1G	B0I1T2	1018 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	UPK1A	O00322	258 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	LY6H	O94772	140 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	OXSR1	O95747	527 aa	Predicted RBP	12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	JUN	P05412	331 aa	Known RBP	12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	IGHV1-2	P23083	117 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	PTAFR	P25105	342 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	EIF1	P41567	113 aa	Known RBP	12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	MANF	P55145	182 aa	Known RBP	12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	RAE1	P78406	368 aa	Known RBP	12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	CHRNB3	Q05901	458 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	FOXF1	Q12946	379 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	SLC29A2	Q14542	456 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	FAM174B	Q3ZCQ3	159 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	SPIN4	Q56A73	249 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	MROH9	Q5TGP6	573 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	KLHL17	Q6TDP4	642 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	LRRC8A	Q8IWT6	810 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	C16orf78	Q8WTQ4	265 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	C3orf49	Q96BT1	292 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	PSD2	Q9BQI7	771 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	CXorf36	Q9H7Y0	433 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	COQ10B	Q9H8M1	238 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	FKBP7	Q9Y680	259 aa		12.03	□□□□□ -0.48
SFMBT1-208	ENST00000497586	IGHV4-61	A0A0C4DH41	118 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	GXYLT2	A0PJZ3	443 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	GJE1	A6NN92	205 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	KIF2A	O00139	706 aa	Predicted RBP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	RGS14	O43566	566 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	TGFA	P01135	160 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	TCP1	P17987	556 aa	Known RBP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	CD40	P25942	277 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	NTS	P30990	170 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	TIA1	P31483	386 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	GABRA3	P34903	492 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	GSTM5	P46439	218 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	SERPINB8	P50452	374 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ARL13A	Q5H913	290 aa	Predicted RBP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	FAM219B	Q5XKK7	198 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	RPS27L	Q71UM5	84 aa	Known RBP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	GAS2L3	Q86XJ1	694 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	MISP	Q8IVT2	679 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	FBF1	Q8TES7	1133 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ZNF483	Q8TF39	744 aa	Predicted RBP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ZFP90	Q8TF47	636 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ZFAND2B	Q8WV99	257 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	KLHDC3	Q9BQ90	382 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	DMGDH	Q9UI17	866 aa	Known RBP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ING1	Q9UK53	422 aa	Predicted RBP	12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	PMF1-BGLAP	U3KQ54	211 aa		12.02	□□□□□ -0.49
SFMBT1-208	ENST00000497586	PRKDC	P78527	4128 aa	Known RBP	12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	HMX2	A2RU54	273 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	MANBA	O00462	879 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	PPP6C	O00743	305 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	SMIM24	O75264	130 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	RBP1	P09455	135 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	IFI6	P09912	130 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	LINGO3	P0C6S8	592 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ZNF23	P17027	643 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	DDC	P20711	480 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	EDNRA	P25101	427 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	SRP14	P37108	136 aa	Known RBP	12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ZNF83	P51522	516 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ACSM2A	Q08AH3	577 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	CALCOCO2	Q13137	446 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	GLE1	Q53GS7	698 aa	Known RBP	12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ACSM2B	Q68CK6	577 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	OR4C3	Q8NH37	302 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	FAM110B	Q8TC76	370 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	PIK3R3	Q92569	461 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	INPP5K	Q9BT40	448 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	TRMO	Q9BU70	441 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	EBPL	Q9BY08	206 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ACPT	Q9BZG2	426 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	RNF14	Q9UBS8	474 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ZNF225	Q9UK10	706 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	GRID1	Q9ULK0	1009 aa		12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
SFMBT1-208	ENST00000497586	IGHV3-15	A0A0B4J1V0	119 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	CCDC188	H7C350	402 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	SMAD9	O15198	467 aa	Known RBP	12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	RAD51D	O75771	328 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	OR4F21	O95013	312 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	KRT6A	P02538	564 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	KRT6B	P04259	564 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	CHN1	P15882	459 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	TSPAN8	P19075	237 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	ENPP1	P22413	925 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	TYK2	P29597	1187 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	KRT6C	P48668	564 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	PRIM2	P49643	509 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	COMP	P49747	757 aa	Predicted RBP	12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	PRSS53	Q2L4Q9	553 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	VPS26B	Q4G0F5	336 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	GALNT18	Q6P9A2	607 aa		12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	PLD6	Q8N2A8	252 aa	Known RBP	12	□□□□□ -0.49
SFMBT1-208	ENST00000497586	SEMA6D	Q8NFY4	1073 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms